Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0270 ATGGCTAATTCTGTTGCGGAAGATGATGTTGATTACGAGAGTGATCCTGAAGAGGCGCAAAGATCACTTCTTACAATGCGGAGACGCGAGGCTAGTGATGATGAAGAAGAAGAGGAAAGAGGGGTAGGAGAAAGAGATGATGATGATTCAGTTAAGAGTGAAGATCTTCGTGTTAGGGTTCGTTCTGATGATTCAGATGGTGAAGGTGGTGTTGCTGATTATGATGAAGATGATGAGGAAGTTGAGGAAGAAGAAGAATACGAGGAAGAAGAGTATGAGGAGGGAGTTGAAGAAGAGGTTTATGAGGAGAAAGGTGAAGGTGGGGTTGATGGTTCAGTGATTGTGGTTAAGGAATCTGAAGGTGGTGTGGTACCCTCTTTGGAAGAAGAAGATTCTGGTGAGGTTAATTTGGAGGAGAAAAAGGAGAACGAACCATTTGCTGTGCCCACTGCTGGTGCCTTTTACATGCATGATGACCGTTTTAGGGACAATTCTAATGCCCGCCAAAGGAGGATGCATGGTGGAAGGAGATTGTGGGAGTCCAAAGATGACAAGAAATGGGGACATGATAAATTCGAGGAAATTTCAGTGCAAGATAGACGCTATGATGAGAGGAGACCTTCTAGGGGTAATTTTCGAGGGCGCGGTAGAACTCGTGGCACTGGTCGTGGAGGACATGTTCGTGGAAACAGAAGAGAATACAATGACAGAGAATATAACAACAGAGAATATAATAACAGAGAATATAATGAAGGTAGCAATCAAAATCAGGTGCCTAAGGTTGTCGTGAAAGGAAGAGGGCCTCGAAGGTATGAACCTACTAACCGAAGGAATGGTCCAGCTCCCCAGGTGCAAAATAAACAATCTAGGAAATCTCAGGATAAAACTTCACTTGCTATTTCAGAGAGAAACTCCATGCCATCATCCAATGCAGAATCTGACCCTGTGCCTGCTAAGAAAACTTCACATGTTGCTTCAAATTTGAACTATGCATCCCCTCCATTTTACCCCTCTGGCTCTTCTAACAAAGACATTAATCTGCCACAAAAACGGGATGTACAAATTGGCAGCACCAGCAGGAACATTCACCCTGTTATGGATGAGGGTTTTCCGGTTCAAAACAATACAATTCATCGGGGAAAGAATGTTGTTGATTCCATCAGCATGGACAAGCTGTATATTGACCAGTCTGTTGGCCCATCTGTTGGAAAGCCTTTGAACAATGTTCATTTGGCACCGCCTGGATCTTCTGGTGTCCATGTTTCTCAATCTCCTTTTCCCAGGCCTGCTGGGCCTGGGAGAGGTGCACCAATCCCATTACAGATGAATTACCAACCTGTTCCCTCACATACTCAAGTAAATAAAGTTTCTCCAACACAACTGCAGGCTATTCAGAGAAGTTCTGCACCAGGGCGAACTTTAACATCTGTGCAAGCTACTGCCGCACAGATGGGCCATCGACCTGGTAGTGGATCTCAGTCTTCATCTCCTCCAAAAAGATCTGCATCAATTAATTCACTTGATTCTGGAGAAACAGATGCGGCCTCAGAATCAGGTAAAGCCAAAGGTGCATTGGTGGGGAAGGGAAAGGGAGCTCCCCAGGGTCCTGGAAGGGGACCTTTTGTTTATGGTGGGGCACAGGTAATGGGTGCTGCTGGAAATATGGGCATCAGTCAAGGAGATCCAAACTTCCCCACCTTCTTACCAGTCATGCAATTTGGGGGCCAGCATCCTGGTGGTATGGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTGCTAATCCTCAGCTTGGTTTGGGAAAATCAGAAATGACATGGCTACCAGTCTTGGCTGGTGCTGCTGGAGCTTTAGGTGCTCAATACTGTTCACCATACCTTGCTGTTGACGGTGCTTATGGTCGACAACCGGGACAGACCTCTGCAATTGATAATTCAAGCAAGGAAAATGTGAATAAAGCTAATAATGAATTGAAGCCACCACAAAAAACTGAGCTGGTAAATGACGAGTATGGACAACGACAGAATAAACCTCGCAGATATTCGGAGATGAATTTTGGTCAGTGA 2070 0.4536 MANSVAEDDVDYESDPEEAQRSLLTMRRREASDDEEEEERGVGERDDDDSVKSEDLRVRVRSDDSDGEGGVADYDEDDEEVEEEEEYEEEEYEEGVEEEVYEEKGEGGVDGSVIVVKESEGGVVPSLEEEDSGEVNLEEKKENEPFAVPTAGAFYMHDDRFRDNSNARQRRMHGGRRLWESKDDKKWGHDKFEEISVQDRRYDERRPSRGNFRGRGRTRGTGRGGHVRGNRREYNDREYNNREYNNREYNEGSNQNQVPKVVVKGRGPRRYEPTNRRNGPAPQVQNKQSRKSQDKTSLAISERNSMPSSNAESDPVPAKKTSHVASNLNYASPPFYPSGSSNKDINLPQKRDVQIGSTSRNIHPVMDEGFPVQNNTIHRGKNVVDSISMDKLYIDQSVGPSVGKPLNNVHLAPPGSSGVHVSQSPFPRPAGPGRGAPIPLQMNYQPVPSHTQVNKVSPTQLQAIQRSSAPGRTLTSVQATAAQMGHRPGSGSQSSSPPKRSASINSLDSGETDAASESGKAKGALVGKGKGAPQGPGRGPFVYGGAQVMGAAGNMGISQGDPNFPTFLPVMQFGGQHPGGMGVPAVGMAFPGYVANPQLGLGKSEMTWLPVLAGAAGALGAQYCSPYLAVDGAYGRQPGQTSAIDNSSKENVNKANNELKPPQKTELVNDEYGQRQNKPRRYSEMNFGQ* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0270 689 MobiDBLite consensus disorder prediction 159 211 - -
Mtr4g0270 689 MobiDBLite consensus disorder prediction 467 513 - -
Mtr4g0270 689 Pfam CASC3/Barentsz eIF4AIII binding 128 217 IPR018545 GO:0003729|GO:0006397|GO:0035145
Mtr4g0270 689 MobiDBLite consensus disorder prediction 159 322 - -
Mtr4g0270 689 MobiDBLite consensus disorder prediction 226 245 - -
Mtr4g0270 689 MobiDBLite consensus disorder prediction 246 260 - -
Mtr4g0270 689 MobiDBLite consensus disorder prediction 1 144 - -
Mtr4g0270 689 PANTHER PROTEIN MLN51 HOMOLOG 1 689 IPR044796 GO:0003729|GO:0006397|GO:0035145
Mtr4g0270 689 MobiDBLite consensus disorder prediction 16 35 - -
Mtr4g0270 689 SMART Btz_2 119 218 IPR018545 GO:0003729|GO:0006397|GO:0035145
Mtr4g0270 689 MobiDBLite consensus disorder prediction 639 689 - -
Mtr4g0270 689 MobiDBLite consensus disorder prediction 45 68 - -
Mtr4g0270 689 MobiDBLite consensus disorder prediction 409 455 - -
Mtr4g0270 689 MobiDBLite consensus disorder prediction 467 539 - -
Mtr4g0270 689 MobiDBLite consensus disorder prediction 69 104 - -
Mtr4g0270 689 MobiDBLite consensus disorder prediction 639 663 - -
Mtr4g0270 689 PANTHER PROTEIN MLN51 HOMOLOG 1 689 - -
Mtr4g0270 689 MobiDBLite consensus disorder prediction 278 322 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0270 - - mtr:MTR_4g011920 1147.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0270 4 3263248 3268352 Mtr4g0270 4 3263248 3268352 ECH