Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0267 ATGGGTGCTTCACTGCCTCCTAAAGAGGCCAATCTATTCAAGCTTATTGTTAAATCATATGAAACAAAGCAATATAAAAAGGGCCTCAAGGCGGCTGATGCTATTTTGAAAAAATTTCCAGATCATGGAGAAACTTTATCAATGAAGGGTTTAACATTAAATTGCATGGATCGTAAGTCTGAAGCATATGAACTTGTTCGTCAAGGATTGAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTTTGGTCTCCTTTATCGGTCAGACAGAGAATACAGGGAGGCAATCAAGTGCTACCGAAATGCACTGAGAATAGATCCTGAAAATATTGAAATTCTGCGTGACTTATCACTCTTACAGGCTCAAATGAGAGATTTATCTGGCTTTGTTGAGACTAGACAACAACTTTTGACTCTTAAGCCAAACCATCGCATGAACTGGATTGGCTTTTCTGTTGCTCATCATTTAAACTCCAATGCATCCAAGGCTGTGGAAATTTTGGAAGCATATGAAGGGACTTTAGAAAATGATCATCCTCCAGATAATGAACGGTTGGAGCATGGGGAAATGATTTTATATAAGATCTCTTTGTTAGAGCAATGTGGATTTCTTGAGAGAGCTCTTGGAGAGTTGCGCCAAAAAGAAACAAAAATTGTTGATAAACTTGCTTTTAAAGAACAAGAGGTTTCACTTCTAGTGAAGCTTGGTCATTTAGAAGAAGCAGAAACGTTATACAGGACATTACTTTCCATGAACCCCGATAATTATAGTTACTATGAAGGTCTCCAAAAGTGTGTTGGATTGTATTTAGAAGATGGGAAGTACTCTGCTGATCAAATAGATCAGTTAGTTTTGTTGTATGAAACACTTGGGCAGCAATATAAGTGGTCTTCTGCAGTAAAGAGAATACCCCTGGATTTTTTACAAGGTGACAAATTTCGAGAAGCAGCAGAAAATTATATTAGGCCTCTCTTAACTAAGGGAGTCCCATCTCTGTTTTCGGATCTTTCTTCTTTGTACACTCATTCTGGGAAGGCAGATATTTTGGAACAACTCATTCTTGAGTTAGAACAGTCAATTAAGACGTCAAGCCAATATCCTGGGAGTACGGAGAAAGAGTCCTCTTCAACTCTTTTGTGGACTTTATTTTTCCTGGCTCAGCATTATGACAGACGTGGCCAATATGAGACTTCTCTTTCTAAAATCGAAGAGGCTATAGAACACACACCTACTGTTATTGATCTATATTCTTTCAAGAGTCGGTTACTGAAGCATGCTGGTGATTTGAATGCTGCTGCTGCATTTGCAGATGAAGCAAGGCTTATGGATCTTGCTGACCGTTATGTTAATAGTGAATGTGTTAAGCGCATGCTGCAGGCTGATCAGGTGGATTTGGCAGAAAAAATTGCTGTATTGTTCACAAAAGAGGGGGATCAACATAACAACCTTCATGATATGCAATGCATGTGGTATGAGCTGGCCTCAGGTGAAAGCTTTTTCCGCCAGGGCAATCTTGGGCGGGCTCTCAAGAAATTTTTAGGAGTGGAGAAGCATTATGCTGATATTACTGAGGACCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACTTTGCGTTCTTATGTTGACATGCTTAAATTTCAAGACCAATTGCACTCACATCCCTATTTTCATAAAGCAGCAGCAGGAGCCATCAGGTGTTATATTAAGTTGCATGATTTTCCCCCAAAGTCTACAACAGAGGAAGATGAGCACATGTCAAATTTGCTTCCTTCTCAGAAAAAGAAATTGCGACAAAAGCAAAGAAAGGCAGAAGCAAGAGCTAAGAAAGAGGCAGAAGAAAAGAACGAAGAGTTAAATTCTAGCGTGGTATCGAAGTCTGGGAAACGACCTGTAAAGCCTGTTGATCCTGATCCACATGGGGAGAAGTTATTACAGGTTGAAGATCCATTGTCCGAAGCTGTTAAATACTTGAAGTTGCTGCAGAAGAATTCACCCGATTCATTGGAAACACATTTGCTCTCTTTTGAATTATATACAAGGAAACGGAAAATTTTGCTTGCCTTTCAGGCTGTAAAGCAGTTACTGAGGTTGGATGCTGACCACCCTGATTCTCATCGTTGCTTGATTAAATTTTTCCATCAATTGGGTTCCATGAGCACTCCTGTAACTGAAAGCGAGAAACTGATATGGAGTGTCTTAGAAGCCGAGCGCTCAACTATTAGTCAGCTGCATGAGAAATCTCTTTTCGAAGCAAACAATGCTTTCCATGACAATCATAAAGATTCTTTGATGCATAGAGCAGCTTTTGCGGAAATCTTGTACATTTTGGATTCTAATAGAAAGTCTGAGGCTGTCAAATTGATTGAAGATTCAGTAAATAATACTGTGCCAAGAAATGGAGCAATTGGACCAATCGGGGAATGGAAACTTGAAGACTGTATTGCAGTTCACAAGCTTCTTGGAACAGTACTTGTTGACCAAGATGCGGCATTGAGGTGGAAAGTGCGTTGTGCAGAGTACTTCCCTTATTCAACTTACTTTGAGGGAAGGCACAGCTCTGCCTCTCCCAACTCGGCCTTTAGTCAGTTACGAAAGAACTCAGAAAATGATGGTCCTAACCATTCAGTTGATAATCAAAATGTGGGTTCTACCACATCGAATGGGAGAGCATTCGAAAATCTCACCATCTCATAA 2703 0.3977 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVFGLLYRSDREYREAIKCYRNALRIDPENIEILRDLSLLQAQMRDLSGFVETRQQLLTLKPNHRMNWIGFSVAHHLNSNASKAVEILEAYEGTLENDHPPDNERLEHGEMILYKISLLEQCGFLERALGELRQKETKIVDKLAFKEQEVSLLVKLGHLEEAETLYRTLLSMNPDNYSYYEGLQKCVGLYLEDGKYSADQIDQLVLLYETLGQQYKWSSAVKRIPLDFLQGDKFREAAENYIRPLLTKGVPSLFSDLSSLYTHSGKADILEQLILELEQSIKTSSQYPGSTEKESSSTLLWTLFFLAQHYDRRGQYETSLSKIEEAIEHTPTVIDLYSFKSRLLKHAGDLNAAAAFADEARLMDLADRYVNSECVKRMLQADQVDLAEKIAVLFTKEGDQHNNLHDMQCMWYELASGESFFRQGNLGRALKKFLGVEKHYADITEDQFDFHSYCLRKMTLRSYVDMLKFQDQLHSHPYFHKAAAGAIRCYIKLHDFPPKSTTEEDEHMSNLLPSQKKKLRQKQRKAEARAKKEAEEKNEELNSSVVSKSGKRPVKPVDPDPHGEKLLQVEDPLSEAVKYLKLLQKNSPDSLETHLLSFELYTRKRKILLAFQAVKQLLRLDADHPDSHRCLIKFFHQLGSMSTPVTESEKLIWSVLEAERSTISQLHEKSLFEANNAFHDNHKDSLMHRAAFAEILYILDSNRKSEAVKLIEDSVNNTVPRNGAIGPIGEWKLEDCIAVHKLLGTVLVDQDAALRWKVRCAEYFPYSTYFEGRHSSASPNSAFSQLRKNSENDGPNHSVDNQNVGSTTSNGRAFENLTIS* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0267 900 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 879 - -
Mtr4g0267 900 PIRSF NAT_A 1 818 IPR021183 -
Mtr4g0267 900 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Mtr4g0267 900 Gene3D - 505 725 - -
Mtr4g0267 900 Coils Coil 596 631 - -
Mtr4g0267 900 Pfam TPR repeat 84 123 - -
Mtr4g0267 900 SUPERFAMILY TPR-like 233 469 IPR011990 GO:0005515
Mtr4g0267 900 MobiDBLite consensus disorder prediction 853 900 - -
Mtr4g0267 900 MobiDBLite consensus disorder prediction 580 645 - -
Mtr4g0267 900 SUPERFAMILY TPR-like 18 260 IPR011990 GO:0005515
Mtr4g0267 900 PANTHER BNAC02G23120D PROTEIN 10 879 - -
Mtr4g0267 900 Gene3D - 2 503 - -
Mtr4g0267 900 MobiDBLite consensus disorder prediction 606 622 - -
Mtr4g0267 900 SMART tpr_5 77 110 IPR019734 GO:0005515
Mtr4g0267 900 SMART tpr_5 380 413 IPR019734 GO:0005515
Mtr4g0267 900 SMART tpr_5 43 76 IPR019734 GO:0005515
Mtr4g0267 900 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0267 Mtr-Chr4 3184976 3200625 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0267 K20792 - gmx:100820094 1536.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0267 4 3184976 3200625 Mtr4g0267 4 3184976 3200625 ECH
Mtr2g3626 2 50232855 50245690 Mtr4g0267 4 3184976 3200625 PCT