Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0260 ATGGGATCAGAACACACTCAAAAGCTTCCACTAATTGACTTCAATAACCTCAACTTTGAAGCCAAAAATCCCAATTGGGAGTTAGTGAAGTCCCAAGTCTATAAGGCATTAGTAGAGTATGGTTGCTTTGAAGCAATTTTTGATAAAGTTCCTTTAGACCTTCGCAAAGCCATATTTACTTCAATAGAAGAGCTCTTTGATCTCCCTTTAGAGACTAAGCTACTCAATGTGTCTAATAAGCCTTATGATGGCTATATTGGTCAATATCCTGTAGTTCCACTTTATGAGAGCATGGCCATTGAGGATGCAAATATCTTAGAGAAAGTAAAAAGCATGACCAATATCTTGTGGCCTGATGGAAACAAAAATTTTAGTGAAACCATACATTCCTTCTCTGAGGAGCTAATTGAGTTGGATCAGATTATTAGGAAGATGATTTTGGAAAGTTTAGGTGTTGAAAAGTACTTGGAAGAACACATGAACTCAACCAATTACCGACTCAGGGCTATGAAGTACAAAGGCCCTCAAACAAGTGATACAAAAGTAGGTCTCACCCCACACACTGACAAGAACTTTGTGACCATATTGTACCAAAATCAAGTGGAAGGTTTAGAGATGATGACCAAAGATGGACAATGGATAAGCTACAAGCCTTCTTCAGGAAGTTTTGTAGTTGTGCTTGGTGATTCTATTCATGCATGGTCAAACGGGAGGTTGCATTCGCCATTTCACAGGGTGATGATGAGTGGGAATGAGGCAAGATATTCAGCAGGGTTGTTCTCTACCCCCAAAGGAGGGTACATTATAAAAGCTCCGGAGGAGCTGGTGGACGAGGAGCACCCTTTGCTCTTTAAGCCTTTTGATCAAGCTGAGTTCCTCAAGTATTATCACTCTCGAGAAGGCGCGAGGGATCGGTTTGCTATCCGCACTTATTGTGGTGTTTGA 945 0.4095 MGSEHTQKLPLIDFNNLNFEAKNPNWELVKSQVYKALVEYGCFEAIFDKVPLDLRKAIFTSIEELFDLPLETKLLNVSNKPYDGYIGQYPVVPLYESMAIEDANILEKVKSMTNILWPDGNKNFSETIHSFSEELIELDQIIRKMILESLGVEKYLEEHMNSTNYRLRAMKYKGPQTSDTKVGLTPHTDKNFVTILYQNQVEGLEMMTKDGQWISYKPSSGSFVVVLGDSIHAWSNGRLHSPFHRVMMSGNEARYSAGLFSTPKGGYIIKAPEELVDEEHPLLFKPFDQAEFLKYYHSREGARDRFAIRTYCGV* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0260 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 5 313 - -
Mtr4g0260 314 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
Mtr4g0260 314 Pfam 2OG-Fe(II) oxygenase superfamily 158 262 IPR044861 -
Mtr4g0260 314 SUPERFAMILY Clavaminate synthase-like 6 299 - -
Mtr4g0260 314 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 263 IPR005123 -
Mtr4g0260 314 Gene3D - 6 310 IPR027443 -
Mtr4g0260 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0260 Mtr-Chr4 3080380 3082329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0260 8 281 Glycosyltransferase AT5G59530 24.221 2.02e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0260 - - gmx:100784444 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0260 4 3080380 3082329 Mtr4g0260 4 3080380 3082329 ECH