Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0259 ATGGGCACAGAAGCCACCCCAAAGCTTCCAATAATTGACTTCAATAACCTCAACTTGGAAGCCAAGAGTCCTAATTGGGAGTTAGTGAAGTCCCAAGTCTATAAGGCATTAGTAGAGTATGGTTGCTTTGAAGCAGTTTTTGATAAAGTTCCTTTAGACCTTCGCAAAGCCATATTTGCTTCACTACAAGAGCTCTTTGATCTCCCTTTAGAAACCAAGCTACTCAATGTGTCTAAGAAGCCTTATCATGGTTATGTTGGTCAATATCCTATGATTCCACTTTTTGAGAGCATGGGCATTGATGATGCAAATATCTTAGAGAAAGTAGACAGTATGACCAACAACTTGTGGCCAGATGGAAACCAAAATTTTAGCAAAACTATACATTCCTTCTCTGAGGAGCTAACAGAGTTGGATCAAATTATTAGGAAGATGATTTTGGAGAGTTTAGGTGTTGAAAAGTACTTGGAGGAACACATGAACTCAACCAATTATCTTCTCAGAGTTATGAAATACAAAGGCCCTCAAACAAGTGACACAAAATTAGGCCTCAGCACACACAGTGACAAGAATGTTGTGACCATATTGTACCAAAATCAAGTGGAGGGTTTAGAGGTGATGACCAAAGATGGACAATGGATAAGCTACAAGCCTTCTTCTTCAGGCAGTTTTGTAGCTATGATTGGTGACTCTATTCATGCATGGTCAAACGGGAGGCTGCATTCGCCGTTTCATCGGGTGATGATGAGTGGGAACGAGGCACGATATTCAACCGGGCTGTTCTCTATCCCGAAAGGAGGGTACATTATAAAAGCTCCGGAGGAGCTTGTGGATGAGGAACACCCTTTGCTCTTTAGGCCTTATGATCATGTTGAATTCCTCAAGTATTATTACACTGAAAAAGGCCAAAGGGACCAATTTGCTATGCGCACTTATTGTGGCGTTTGA 948 0.4135 MGTEATPKLPIIDFNNLNLEAKSPNWELVKSQVYKALVEYGCFEAVFDKVPLDLRKAIFASLQELFDLPLETKLLNVSKKPYHGYVGQYPMIPLFESMGIDDANILEKVDSMTNNLWPDGNQNFSKTIHSFSEELTELDQIIRKMILESLGVEKYLEEHMNSTNYLLRVMKYKGPQTSDTKLGLSTHSDKNVVTILYQNQVEGLEVMTKDGQWISYKPSSSGSFVAMIGDSIHAWSNGRLHSPFHRVMMSGNEARYSTGLFSIPKGGYIIKAPEELVDEEHPLLFRPYDHVEFLKYYYTEKGQRDQFAMRTYCGV* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0259 315 Gene3D - 7 313 IPR027443 -
Mtr4g0259 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 264 IPR005123 -
Mtr4g0259 315 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
Mtr4g0259 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 6 314 - -
Mtr4g0259 315 Pfam 2OG-Fe(II) oxygenase superfamily 159 261 IPR044861 -
Mtr4g0259 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 6 314 - -
Mtr4g0259 315 SUPERFAMILY Clavaminate synthase-like 6 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0259 Mtr-Chr4 3065608 3067326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0259 8 298 Glycosyltransferase AT5G59530 23.588 4.36e-17 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0259 - - gmx:100784444 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0259 4 3065608 3067326 Mtr4g0259 4 3065608 3067326 ECH