Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0246 ATGGCGAAGGGAGGACAATGCTTGTTGGAGAAGCTTTGGAGGTGTATTCGAACGGTTTTCTTTGTTGTTGCATTGGTGGTTTCGCTGATTGTTACGTCGCTTCCGGTGGTTGTTGCGGTGGTTGATGTTCTTGTTCCGTGTGTTTTGATCTCCAATTTTACTTGTGTTAATTGCTATAGTTTCAAACAGCTTCTTCGTCGTTACTCTTTCAAGAGTTCTTTGATGGACATTCCTCTTGTTTCAGTCTTAAGATCATTCATCATCATTTGTGTTTATTCAATTTGTGATGGGCCTGCTCTTTCACACGGTCCTTACCTTGGAACTGTGACTCTATGTTCTTTTTCCTCAATTATTCTCCTTTCAGTCAAAGCTTGTCTTTTCACTGTAAATTCCCAGATTGAAGCTGAAGCTTCATTGGCTTCTCTAAAGAGGCAGAGACTCCATTTGAAGAAGTCTTGGGGAATGCCTGTGCTGTTTCTTTCGTCGGTTGTGTTTGCTCTTGGTCATACCGTTGTTGCTTATAGAACCAGCTGCAGAGCACGTAGAAAGTTCTTGTTTCATCGCATTGACCCTGAATCTGTCCTATCGTGCAAAAGTGCTTTCAGTGTCTATCCAAAGGTCCCACGTTCTCCTACTCCTTGTGGGGGAAGAACCCCAAAAAGTGACAGTGAAATGAGGCGGAGACCTTTTGGCACAGCTCGTGACGAAGCATTGCAGGCCAGATTACTTGCAGACTCAGACAGTTGTTTCATTACCTGCCAAGGACTTACTCTTCATTACAAGCTCAGCTTACCTGGATCACCTCCGCATACTTTGTCCTCAACAGCCTGTGTTGAATCAAATTCTAGGTGCAGCACTTCATCAATGGCTGGAGGATTGGAGAAATTTGATAGACATCAGCTAGATATGTCTCCGAAGATAGAGCGGCATTTATACAGGAGCTATAGCAATCAACTCAATGGATCATCTCTATACACACCTCTATTAGATAGTACTGCAACTACTGTTTTTTCTGAAGATATCCCTATTTTTCATCTAGATGGTATTTGTGAAGAAAATGAAACTAGTAAATTGGATTCTTTAACTCTGGAGCAAAATATTGGTCAATTAGGTGCTGTTTTAATACATGGGTTTGGTGGAGGAGTTTTCTCTTGGAGGCATGTGATGGGGTCTCTTGCTAGGGAGATTAATTGCACAGTTGCTGCATTCGATCGGCCTGGTTGGGGATTAAGTTCAAGACCACGTCCGGAGGACTGGGAAGAAAAGGAATTGCCCAATCCTTATAAGCTTGAAAGTCAGATTGACTTGCTTTTATCATTCTGTTCTGAGATTGGATTTTCGTCGGTGGTGTTAATTGGTCATGATGATGGAGGATTGCTTGCTCTTATGGCTGCACAAAGAATTAAAACATCAATGAATTGTTGTAATGTTACTATAAAAGGGGTTGTATTGCTAAATGTTAGCTTGTCAAGGGAAGTGGTTCCTTCCTTTGCAAGAATCCTCCTGCATACCTCACTTGGAAAGAAGCATATGGTTCGACCTCTACTAAGGATGGAAATCACTCAAGTGGTGAATCGGCGTGCTTGGTATGATGCTACCAAATTGACTACAGAAGTTTTGAATCTCTATAAGGCTCCACTATCTGTTGAAGGATGGGATGAAGCTGTTCATGAGATTGGTAAGTTGTCATCTGAAACCATCCTTGCAGCAAAAAATGCCGAATCATTGCTACAAGCTGTAGAAGACATTCCAGTCTTAGTTATTGCCGGTGCTGAAGATTCCCTTGTCTCCTTAAAATCTTGTCAAGCTATGGCCTCAAAACTAGAAAATTCTAGACTTCTTGCAATATCAGGATGTGGCCATTTACCCCATGAAGAGTGTCCAAAGGCATTGCTGGCAGCTATATCACCCTTCATTAGTAGACTCCAGACTGCATCTGACTCTCAAAGACAATAA 1956 0.4202 MAKGGQCLLEKLWRCIRTVFFVVALVVSLIVTSLPVVVAVVDVLVPCVLISNFTCVNCYSFKQLLRRYSFKSSLMDIPLVSVLRSFIIICVYSICDGPALSHGPYLGTVTLCSFSSIILLSVKACLFTVNSQIEAEASLASLKRQRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKFLFHRIDPESVLSCKSAFSVYPKVPRSPTPCGGRTPKSDSEMRRRPFGTARDEALQARLLADSDSCFITCQGLTLHYKLSLPGSPPHTLSSTACVESNSRCSTSSMAGGLEKFDRHQLDMSPKIERHLYRSYSNQLNGSSLYTPLLDSTATTVFSEDIPIFHLDGICEENETSKLDSLTLEQNIGQLGAVLIHGFGGGVFSWRHVMGSLAREINCTVAAFDRPGWGLSSRPRPEDWEEKELPNPYKLESQIDLLLSFCSEIGFSSVVLIGHDDGGLLALMAAQRIKTSMNCCNVTIKGVVLLNVSLSREVVPSFARILLHTSLGKKHMVRPLLRMEITQVVNRRAWYDATKLTTEVLNLYKAPLSVEGWDEAVHEIGKLSSETILAAKNAESLLQAVEDIPVLVIAGAEDSLVSLKSCQAMASKLENSRLLAISGCGHLPHEECPKALLAAISPFISRLQTASDSQRQ* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0246 651 Gene3D alpha/beta hydrolase 365 650 IPR029058 -
Mtr4g0246 651 PRINTS Epoxide hydrolase signature 376 394 IPR000639 GO:0003824
Mtr4g0246 651 PRINTS Epoxide hydrolase signature 451 464 IPR000639 GO:0003824
Mtr4g0246 651 PRINTS Epoxide hydrolase signature 583 599 IPR000639 GO:0003824
Mtr4g0246 651 PRINTS Epoxide hydrolase signature 616 638 IPR000639 GO:0003824
Mtr4g0246 651 PANTHER HYDROLASE 3 643 - -
Mtr4g0246 651 PANTHER ALPHA/BETA FOLD HYDROLASE 3 643 - -
Mtr4g0246 651 Pfam Alpha/beta hydrolase family 373 633 IPR000073 -
Mtr4g0246 651 SUPERFAMILY alpha/beta-Hydrolases 373 641 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0246 Mtr-Chr4 2925056 2930486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0246 5 647 Miscellaneous Gene Families AT1G80280 64.012 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0246 - - gmx:100817742 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0246 4 2925056 2930486 Mtr4g0246 4 2925056 2930486 ECH
Mtr2g3640 2 50405194 50410708 Mtr4g0246 4 2925056 2930486 PCT