LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g0244	ATGTTACGAAGATTACTCATCTCTTCACAACTCAAAACCCTAACTTCTCGCCGATCTCCTTCCTCCGCCGTTGCTGTTTCCTTACTCTCCCGCCACCACTTCTCTACTCAATCCAGTGATGACAGTACTACTGGAATTAAAAAGAAGGTTGAGGATGTAGTTCCAATTGCTACTGGTCATGAGCGTGAGGAGATTCAGGCTCAACTTGAGGGTAGGGATATTCTTGAAATTGACCATCCTGAAGGTCCTTTCGGCACTAAGGAAGCACCTGCTGTTGTTAAATCTTACTACGATAAAAGGATAGTTGGATGCCCAGGTGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGACAAACCTCATGAATGTCCCGTGTGTGCACAGTATTTTGTGCTCGAAGTGGTAGGACCTGGTGGATCACCTTATGGGCACGGCGATCCTGATCATCATCACTAA	471	0.465	MLRRLLISSQLKTLTSRRSPSSAVAVSLLSRHHFSTQSSDDSTTGIKKKVEDVVPIATGHEREEIQAQLEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKDKPHECPVCAQYFVLEVVGPGGSPYGHGDPDHHH*	157

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr4g0244	156	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	1	155	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Mtr4g0244	156	Gene3D	Cytochrome c oxidase, subunit Vb	46	140	IPR036972	GO:0005740\|GO:0005751\|GO:0006123
	Mtr4g0244	156	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B	1	155	-	-
	Mtr4g0244	156	CDD	Cyt_c_Oxidase_Vb	47	142	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Mtr4g0244	156	Pfam	Cytochrome c oxidase subunit Vb	57	143	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Mtr4g0244	156	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	45	144	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Mtr4g0244	156	SUPERFAMILY	Rubredoxin-like	47	143	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g0244	Mtr-Chr4	2875217	2880340	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g0244	K02265		-	gmx:100780886	251.136

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr4g0244	4	2875217	2880340	Mtr2g3652	2	50674280	50678740	ECH
	Mtr4g0244	4	2875217	2880340	Mtr4g0244	4	2875217	2880340	ECH
	Mtr2g3652	2	50674280	50678740	Mtr4g0244	4	2875217	2880340	PCT