Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0241 ATGGTGAAGGGTAAGTTAAAGGAACCTGTTCTTACGGCGTTCACACCTAATGGTGACTATGCAGCTATTCTGTCTGCAAATGGGACGGCAAAAATTTGGAATACAAACAGTGGAGATTTGTTAGCAGAGTGGAAGCCATCAGATGGAGATCATGATATTCGTTATTCTTGCATTGCATGCAGTTTCACTGGGAAAAAGCGTAAAAAAGGTAAGGGACCTTGCTTATTAGCTCTCGGAACGGAAGATGGAAAAGTTCTCGCTGTTGATGTTTCCACTGGTGAGAGGAAGTGGCCTACTAGTCATCCGATTCCCGGTGGGATTTGCGGACTTTCATTTGCAAAAAAGGGACAGCTTCTTTGTGTTGTTGGACATGATGGGAAGGCATATGAGTTTAATTCCGAAACAGGAGAGCTTCTAAAGGAGTTTAAAATCTCAAAAAAGTCCATCTCTTCACTGGCTTTCTCACATGATGAAAAATATTTAGCTATTTTCAGCTCTAGACTACGAGTTATAAGTTGGGAAACTGGGAAAGAGGTTCTGAAGTGCCCTAATGATATGGGAAATATACATCGTGTTTCCATATCCAATGATGCAAAATATTTAATTACATCAGATTCTGAGAGTAAACATCTTCAAGTTTGGAGGTGTGACTTAAGTTTAGGAACTGTGAGTAGTGGTCCAACACTACCCTTGAGGCATGCTCCATTGGTTCTTGATTGCCACTCCGGTGGCAATGAAAATGATTTAGTTGTCTCGGCAGTTACGTCTTCAGGTGGAACTTACATATGGAAGAATTTGAATGCCTCTTCTGAAGATCAAATACACCGAACTAAAATAACCTTGAAAACAGAAAAAGTTGAAAGTGATAAGGAAAATAGTGAAAGTTCAAAGAAAAGGTGCAGTTCCTTTATTGCATCCAAATTCCAATCCATGGGGGAAGACGGACAGATGCAAGCTTTGGTGACTTATGGCTCTGTAGATCATCCACAGTTTACAGTCTTAAATATTAGTGATTTAGGGGAGAATGTGGTCTTAACTGTGGGAGATGAGCTTGATTCCATTCAGAAGCAAGACAGCCTTTCCAAGAAAGTAGAAAAGGAAAGCAAAAAGTCTAAGAAAAGACAAGCAACATCTGATCCTGATCTTCCAACCACAACTGACAAGGTGGATTTGGATCAATGTGAGGTTGTTGACGGAGTCCTTGATGATGATCCAAATGAGCAAACAATTGGGGAGAAACTGACTAATCTCAATTTACTGGATGAAAACAAATCCAAGAGTGACAAAGAGCAAGTTTCATCGAAGCCTCCAAGTGCAGATAGTGTAGATGTTTTGCTTAAGCAAGCATTGAATGCTGATGACCGTGCCCTTCTTCTGGATTGCTTGTACACGCAAGATGAGAAGGTTATTATGAACTCAGTTGCGCAATTGAACCCATCCAACGTCCTCAAACTTCTTAATTCTCTTATATCCATTATTGAATCTAGGGGTGCAATTTTGGCATGTGCTCTTCCATGGCTGAAATGTCTACTCCTACAGCATGCAAGCGGAATAATGTCCCAGGAATCTTCTTTAAAAGTTTTGAACTCTTTGTATCAACTGATTGAGTCTAGAGTCTCCACTTTTAAATCTGTCTTCCAACTCTCAAGTTTCTTAGACATCCTTTACACCGGGGTGCTTGATGAGGAGGTAGATGAAGTTGAAACAGTGCCAATTATCTATGTGGACACGGATGATAGTGAAAGAGAATCCGAGGATGCCATGGACACCGACAAAGATAGCAAAGATGGGGAACTATCAGATGAAGCATTTGATAATCTAAGTGACGTTGAAGGTAGTGATGGTATGATGGAAGATTAA 1860 0.4048 MVKGKLKEPVLTAFTPNGDYAAILSANGTAKIWNTNSGDLLAEWKPSDGDHDIRYSCIACSFTGKKRKKGKGPCLLALGTEDGKVLAVDVSTGERKWPTSHPIPGGICGLSFAKKGQLLCVVGHDGKAYEFNSETGELLKEFKISKKSISSLAFSHDEKYLAIFSSRLRVISWETGKEVLKCPNDMGNIHRVSISNDAKYLITSDSESKHLQVWRCDLSLGTVSSGPTLPLRHAPLVLDCHSGGNENDLVVSAVTSSGGTYIWKNLNASSEDQIHRTKITLKTEKVESDKENSESSKKRCSSFIASKFQSMGEDGQMQALVTYGSVDHPQFTVLNISDLGENVVLTVGDELDSIQKQDSLSKKVEKESKKSKKRQATSDPDLPTTTDKVDLDQCEVVDGVLDDDPNEQTIGEKLTNLNLLDENKSKSDKEQVSSKPPSADSVDVLLKQALNADDRALLLDCLYTQDEKVIMNSVAQLNPSNVLKLLNSLISIIESRGAILACALPWLKCLLLQHASGIMSQESSLKVLNSLYQLIESRVSTFKSVFQLSSFLDILYTGVLDEEVDEVETVPIIYVDTDDSERESEDAMDTDKDSKDGELSDEAFDNLSDVEGSDGMMED* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0241 619 MobiDBLite consensus disorder prediction 603 619 - -
Mtr4g0241 619 Gene3D - 11 297 IPR015943 GO:0005515
Mtr4g0241 619 MobiDBLite consensus disorder prediction 357 377 - -
Mtr4g0241 619 Pfam Anaphase-promoting complex subunit 4 WD40 domain 75 155 IPR024977 -
Mtr4g0241 619 PANTHER WD REPEAT-CONTAINING 65 617 - -
Mtr4g0241 619 MobiDBLite consensus disorder prediction 587 602 - -
Mtr4g0241 619 PANTHER OS01G0649000 PROTEIN 65 617 - -
Mtr4g0241 619 MobiDBLite consensus disorder prediction 357 389 - -
Mtr4g0241 619 MobiDBLite consensus disorder prediction 421 440 - -
Mtr4g0241 619 MobiDBLite consensus disorder prediction 575 619 - -
Mtr4g0241 619 Pfam Dip2/Utp12 Family 454 555 IPR007148 -
Mtr4g0241 619 SMART WD40_4 96 132 IPR001680 GO:0005515
Mtr4g0241 619 SMART WD40_4 2 34 IPR001680 GO:0005515
Mtr4g0241 619 SMART WD40_4 175 215 IPR001680 GO:0005515
Mtr4g0241 619 SMART WD40_4 37 89 IPR001680 GO:0005515
Mtr4g0241 619 SMART WD40_4 135 174 IPR001680 GO:0005515
Mtr4g0241 619 SUPERFAMILY WD40 repeat-like 13 266 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0241 K14546 - gmx:100792757 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0241 4 2842040 2849818 Mtr4g0241 4 2842040 2849818 ECH