Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0223 ATGGTCGTTTTCTCTGTAAAACCCTTATTCACCATCTTCGTCGTTTCACTCACTCTCCTTGTCGTTTTGACATTGTTATCACCTCGTAACCCTTTCTCCCAGAATCCTATTTCTCAACAACCCTCACTAGGGGAGGTAGATATATGGAGTGTTCGGAGACTCATGGAATGGAGACCTTGCAAATGGTGGTTACAAGGGCATCTAACAGCTCTACCATTAGAAACCAATGGATATATCAGAGTGGATTGCTACGGAGGCCTCAATCAGATGCGAAGAGATTTCTGTGATGGTGTGGGAATCGCCCGGCTGTTAAATGCATCTCTTGTCTTGCCAAAGTTTGAAGTGGCTTCATATTGGAATGAAACAAGTGGTTTTGCGGATGTGTATGATGTAGACTACTTCATGCAACATATGAATGGCTTTGTCAAAGTCGTCAAAACGTTACCACCGGAGATTGCTACAAAAGAACCAGTTCAAGTGGACTGTAGCAAAAGGAAAGGCCAATTTGATTATGTTGAAAGCGTTCTCCCATCTCTGTTAAAACACAAATACATTTCAATCACACCAGCAATGTCCCAAAGAAGAGACAGATATCCTTTGCATGCAAAAGCTGCTCTTTGTCAAGCTTGTTACAAGGCGTTACGTCTCGCCAAACCACTGGAAACGAAAGCCTCTAAGCTTCTAGATGCAATACCTAAACCCTTTTTGTCTCTCCACCTTCGTTTTGAGCCCGACATGGTTGCATACAGTCAGTGCCAATACACGGGCCTTTCACCTGCTTCCATCAAAGCTGTAGAAGCTGCAGTAGCACTAGTGGAGAGAAAACCATGGACTGGAGAGTTAGCCCGCATTTGGAGACAACGTGGGAAGTGTCCCCTCACACCTAATGAGACAGCTTTAATACTTCAATCTCTTTCTATTCCGCCAACCACGAATATATATCTGGCAGCTGGAGATGGTCTGATGGAAATCGAAGGATTAACAGATATTTACACCAACATATTCACCAAGTCTAGCCTTCTCAATGAAGAAGACTTCACAAGCATGCATGGAAATACAAAAGCTGCTTTGGATTATTATATATCTATCAATAGTGATTCCTATATGGCTACATATTTTGGGAACATGGACAAGATGGTTGCAGCAATGAGAGCTTTCAAAGGGTTGTATAAAACTCTATTTTTAAGTAGAAGAGGATTTGCTGAATTAACCTCACAAGGTCTTAGAGGAAAAGAGTTGATGCAAGCCCTATGGAAGGTTCACAGAGATGAGTTTGTCGCGGGAAGAGGCTCTGCTCTTCCTGAGTGTTTTTGTGAATTCAAGTTGTGA 1329 0.4251 MVVFSVKPLFTIFVVSLTLLVVLTLLSPRNPFSQNPISQQPSLGEVDIWSVRRLMEWRPCKWWLQGHLTALPLETNGYIRVDCYGGLNQMRRDFCDGVGIARLLNASLVLPKFEVASYWNETSGFADVYDVDYFMQHMNGFVKVVKTLPPEIATKEPVQVDCSKRKGQFDYVESVLPSLLKHKYISITPAMSQRRDRYPLHAKAALCQACYKALRLAKPLETKASKLLDAIPKPFLSLHLRFEPDMVAYSQCQYTGLSPASIKAVEAAVALVERKPWTGELARIWRQRGKCPLTPNETALILQSLSIPPTTNIYLAAGDGLMEIEGLTDIYTNIFTKSSLLNEEDFTSMHGNTKAALDYYISINSDSYMATYFGNMDKMVAAMRAFKGLYKTLFLSRRGFAELTSQGLRGKELMQALWKVHRDEFVAGRGSALPECFCEFKL* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0223 442 PANTHER OS02G0726500 PROTEIN-RELATED 4 441 - -
Mtr4g0223 442 PANTHER O-FUCOSYLTRANSFERASE 13 4 441 - -
Mtr4g0223 442 CDD O-FucT_plant 78 392 IPR024709 -
Mtr4g0223 442 Pfam GDP-fucose protein O-fucosyltransferase 78 386 IPR019378 -
Mtr4g0223 442 PIRSF UCP009360 2 441 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0223 Mtr-Chr4 2698588 2704695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0223 30 440 Miscellaneous Gene Families AT3G54100 31.469 4.56e-58 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0223 - - gmx:100801207 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0223 4 2698588 2704695 Mtr4g0223 4 2698588 2704695 ECH