Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0208 ATGGAGAAAGAACCGCAACAAAGTGATGTCAAAGATTCTTCTGCTGAAGTCTTGTCTGTTGAACTCTCTGCTCCTCCCAATTGGAAGAAATTGTTCTTCCCTAAGAAGAAAGGAACACCAAGAAAACCTGAGATCGTTTTCGTTGCTCCAACTGGAGAAGAGATAAGTTCCAAAGCACAATTGAAGAAGTACCTGAAAAATCATTCTGGGGATCCTGATATATCAGAGTTTCATTGGGGAACCGGCGAGACGCCAAGGCGATCAACAAGGATTAGGGAGACTGCCAAAACAACCCCTCCACCTGCACAAGCTGAGCCTCCGAAGAAACGTAGTCGAAAGAAGGAGGACAAGGAAACTGAAACTGAGTCTCCTTCAGAGGAAGTCAAGGAAAAGGGGAAGTCTTCTGCTGAAGAACTGAAAGCTGATCCCAGTGATGCTGATAAGAACGTCAATGCTGAGGAAATTAAGCAAAGTAATGTGGAAGCTGAAACTGTGATAGCTGAGAAGCCTACATTGATGGCCGAACCGGCGAAACGAATTATTGTGCATGCTTTGTCTACTGTTGCTGCTGCAAAACCGCATTTGGAAAAGCCTCAAGTGGAAGACACTTCTATGACTGAACCGGTGAAACAAGTTTCTGAAGAAGCTTTGAATGCAGTTGTCGCTGAAAAACCGCAATTGGAAAATCCTCAAGTGGAAGACACATTGATGGCAGAACCAACAGAAAAACTTCTTGAGGAAGCTTCGGATGCAGCTGTTGCTGAAAAGCCACAATTGGAAAAGCCTCAAGTGGAAGAAATATCAATGGCGGAACCGGCAGAACAACTTCTTGAGAAATCTTTGGATCCTGTTGTTGCTGAAAAACTGTCAGGGGAGGCACCAGTTGAGTTGGAAAAAGAAAACAGAACAGCTGAATTGGAAAAGCCTCAAGTGGAAGAACCATCTCTGGCGGAACCGGTGGAACAACTTTCTGTGGAAGCTTTGGACGCTGTTGTTGCTGAAAAACCCAAAGAGGAAGCACCAGTTGAATTGGAGAAAGAAAATGGTACAGCTGATAGCAGTTATAAGCAAGAGAAATCCGGCGCAGAGGAAAGCGAAGGTGCTGAGAAAGTGAGTCTCAATGTTGAAGATATTATTAATGGTAAGAATGAAATTTCAGCAAGTGATGAATAG 1173 0.4399 MEKEPQQSDVKDSSAEVLSVELSAPPNWKKLFFPKKKGTPRKPEIVFVAPTGEEISSKAQLKKYLKNHSGDPDISEFHWGTGETPRRSTRIRETAKTTPPPAQAEPPKKRSRKKEDKETETESPSEEVKEKGKSSAEELKADPSDADKNVNAEEIKQSNVEAETVIAEKPTLMAEPAKRIIVHALSTVAAAKPHLEKPQVEDTSMTEPVKQVSEEALNAVVAEKPQLENPQVEDTLMAEPTEKLLEEASDAAVAEKPQLEKPQVEEISMAEPAEQLLEKSLDPVVAEKLSGEAPVELEKENRTAELEKPQVEEPSLAEPVEQLSVEALDAVVAEKPKEEAPVELEKENGTADSSYKQEKSGAEESEGAEKVSLNVEDIINGKNEISASDE* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0208 390 MobiDBLite consensus disorder prediction 333 371 - -
Mtr4g0208 390 MobiDBLite consensus disorder prediction 333 390 - -
Mtr4g0208 390 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 14 84 IPR001739 GO:0003677
Mtr4g0208 390 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 13 385 IPR039622 -
Mtr4g0208 390 MobiDBLite consensus disorder prediction 292 314 - -
Mtr4g0208 390 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE 13 385 - -
Mtr4g0208 390 MobiDBLite consensus disorder prediction 66 155 - -
Mtr4g0208 390 MobiDBLite consensus disorder prediction 222 319 - -
Mtr4g0208 390 Gene3D - 1 164 - -
Mtr4g0208 390 Pfam Methyl-CpG binding domain 22 83 IPR001739 GO:0003677
Mtr4g0208 390 MobiDBLite consensus disorder prediction 106 154 - -
Mtr4g0208 390 MobiDBLite consensus disorder prediction 1 21 - -
Mtr4g0208 390 MobiDBLite consensus disorder prediction 239 262 - -
Mtr4g0208 390 SUPERFAMILY DNA-binding domain 13 111 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0208 Mtr-Chr4 2428097 2432900 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0208 - - mtr:MTR_4g010210 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0208 4 2428097 2432900 Mtr4g0208 4 2428097 2432900 ECH