Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0198 ATGTCTGCTGCTGTGTGCGGAAGCAAGAGATCTTTCTTCGAAGAACAACTTCCTCCTTCTCCTCCGTTATCTAAGAGGCTTCGTTGTTCCTCTTCTACTTCTCCGATTCGTTTTCCGACTATTCCTTCTCTCTTTGATCAGCTCCGTAATCTCTTCCCTCATATGGACCAATTGGTTCTTGAGAGAGCTCTCCAAGAATGTGACAACGATCTAGATGCTGCTATCAAGAGCCTGAATGAGCTTTACTTGGGAGCTGCAGGTGGGAATTCTGGAACTGCTGAAGAATCTGAGATTGATGTCAATGTGGATGCAGGTAAATTGGAGAATGATGGGAATGCTTCTGCTTCTGAGAATCAATCTACTTTGAACAGCCTTCCTGCAGATGGAGCCGAATGGATTGACTTTTTTGTTCGAGAAATGATGGTTGCTACCAGTGTTGATGATGCTAGAGCCCGTGCTGCTAGAATGCTGGAGGTTCTCGAGAAATCGATCAGTGAACGGGCAAGGGCTGAGGCGACAGATGCTCTTCAGAAGGAAAATTTGATGCTGAAGGAGCAAATCGAAGTGCTGATTAAGGAGAAAAATTCTTTTAAAAACGCATTTAGGATCCAGCACGAGCGTCTTTCTGATTATGATAATAAGAATCAAGAATTGCAGCATTTGAAGCAGTTGGCGTCTCAATACCAGGAGCAGATCAGAACTCTTGAGATGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAGAGCAACGGATTTCAAGGGCATTTCCCTCCTGATATCTTCTAA 795 0.4403 MSAAVCGSKRSFFEEQLPPSPPLSKRLRCSSSTSPIRFPTIPSLFDQLRNLFPHMDQLVLERALQECDNDLDAAIKSLNELYLGAAGGNSGTAEESEIDVNVDAGKLENDGNASASENQSTLNSLPADGAEWIDFFVREMMVATSVDDARARAARMLEVLEKSISERARAEATDALQKENLMLKEQIEVLIKEKNSFKNAFRIQHERLSDYDNKNQELQHLKQLASQYQEQIRTLEMNNYALAMHLKQAQQSNGFQGHFPPDIF* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0198 264 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 264 - -
Mtr4g0198 264 Pfam CUE domain 45 80 IPR003892 GO:0043130
Mtr4g0198 264 Gene3D - 40 84 - -
Mtr4g0198 264 Coils Coil 211 238 - -
Mtr4g0198 264 ProSiteProfiles CUE domain profile. 40 83 IPR003892 GO:0043130
Mtr4g0198 264 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 264 - -
Mtr4g0198 264 Coils Coil 173 193 - -
Mtr4g0198 264 CDD CUE 43 78 - -
Mtr4g0198 264 SUPERFAMILY UBA-like 35 84 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0198 Mtr-Chr4 2358602 2363053 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0198 - - gmx:100813137 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0198 4 2358602 2363053 Mtr4g0198 4 2358602 2363053 ECH
Mtr2g3699 2 51064831 51067665 Mtr4g0198 4 2358602 2363053 PCT