Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0194 ATGGAGTTTGAAACTCGTATTGTTACCCCTATTAATAACAATGAGAAACCTGATTCAGGAACACAACCAAGTCAGAAGAAAAAGAGGTCCATCGTGTGGGAATACTTTACAGTGGAAGCTGTTGAAGCTGGAAAATCCAGAGCTTATTGTAAACATTGCAATAAATCGTTTCATTATATAAGTGGTTCAAAAACAGTTGGCACAACTAATTTGAAAAAGCACATTTCTTTGGGACTCTGTCAAGGAATGCAGCAGAAAAGTCAACCAAACTCACATCCCGAAAATGGTGGTTTGCAGGATAATGCCATTCGGCCAAAGAAAAGGCAAAGAGAAACACCTGCATATGCTGGTAATGGTATCTCATTTGATCAGGAGCGTTGCATCAATGACATCGCTAAAATGATAATTTTACATGATTACCCTCTTGATATTGTGAAACACCAGGGCTTCATTGCTTTTGTACGGACTCTTCATCCCATGTTCAATCCATCGTGTTTGAATTCTGTTGAAGGGTGTGTTTCTTCTATGTATCTCAGAGAGAAGCAAAATCTGTTAGATCTTATTAATGGGATTCCTGGACGGCTCAACCTGACATTGGACTTGTGGACTTCAAACCAGGAAACAGGGTATGTTTTTATTCGAGGACACTTCATTGATAGTGATTGCAACGTACATCATCCTATTCTCAATGTTGTTAAAGTACCATTTCCTGATTCAGGTGATTCCCTAAACCAAACCATAATGACCTGCATATCTGATTGGCATTTGGAGGGTCGGGTACTTACCCTTGCACTTGATAAATCTTTCTCAAGTGAGACTGTGAAGGTAAATTTACGAGGCAATCTATCTGTTAATAACCCTGTGATTCTCAGTGGTCAGTTATTAAACCAGAATTGCTATGCCCGTGTTCTCAGCCGCCTTGCAGTAGATGTGCTACGGGCAATGAGCAAAACTATTAGCAAAGTTCGTGAGTGTGTGAAGTTTGTGAAATATTCTGAATCTCATGAAGAGAAGTTTATCGAGCTTAAGCAACAATTACAAGTACCTGGTTTGGTGAACCTTTTGATTGATGACCAGTATAATTGGGATACAACATACCATATGCTTGTAGCTGCCTGTGAATTAAAGGAAGTCTTTGCTTGCTTTGATGCCACTTGTCCTGATTTCTCGATGACTCTAACTATGGAAGACTGGAAGCAAGTTGAAACTCTCTGCACATATTTGAAGTATATGTATGATGCAGCTCACATATTAACTGCCCAACAACTCCCAACAGCCAACTTATTTTTTCTTGAAGTGTCAAAACTTCATATGGAGTTGACTAATGCAGCCTTCAGCCAGGATCCTTTTCTTAGCAGTTTGATTTTTCCTTTGCTCAAAAACTTTGATCAATATTGGAGAGATAGCTGCCTCATCTTGGCTGTTGCTGTAGCCATGGACCCAAGGCATAAAATGAAACTTGTGGAATCCACCTTTACTACAATATTTGGAGAAAATGCTGAGCCATGGATAAGAATTGTTGAGGATGGTCTTCATGAACTATTCATTGATTATAACACCGAAATGCTTCATTTCACGGCAACAAATGGCGATGATGTGGATGAGATTATGTTAAACACTGAGCCATATGAAGGGCCGGTTGATGGTTCCCTTTTTGTTGATGAAGGTGGACTTTCCGACTTTGAGTTTAACATATCTGATTTTACTAGTATGCAGCAATTCAAGTCGGAAATGGATGAGTATTTGGAAGAACCTTTGCTGTCCGAATCTAAAGAATTTGATATTCTTAGTTGGTGGAGGGAAAATCGATCAAAGTATCCAACATTGTCTAGAGCTGCATCTGATATTTTGTCTATGTCAATATCTACTGTGTCTGCAGATTCTGTTTTCGACACAGAAGTTAGAAAAATGGATGACTACCGGAGTTCGTTAGACTCGCAGACTCTTGAAGCCCTTATTTGTGCCAAGGATTGGTTCCAGCATAACTCTATAACCAAAAATGTTTCAAATACACCGAGAAAATGA 2025 0.3921 MEFETRIVTPINNNEKPDSGTQPSQKKKRSIVWEYFTVEAVEAGKSRAYCKHCNKSFHYISGSKTVGTTNLKKHISLGLCQGMQQKSQPNSHPENGGLQDNAIRPKKRQRETPAYAGNGISFDQERCINDIAKMIILHDYPLDIVKHQGFIAFVRTLHPMFNPSCLNSVEGCVSSMYLREKQNLLDLINGIPGRLNLTLDLWTSNQETGYVFIRGHFIDSDCNVHHPILNVVKVPFPDSGDSLNQTIMTCISDWHLEGRVLTLALDKSFSSETVKVNLRGNLSVNNPVILSGQLLNQNCYARVLSRLAVDVLRAMSKTISKVRECVKFVKYSESHEEKFIELKQQLQVPGLVNLLIDDQYNWDTTYHMLVAACELKEVFACFDATCPDFSMTLTMEDWKQVETLCTYLKYMYDAAHILTAQQLPTANLFFLEVSKLHMELTNAAFSQDPFLSSLIFPLLKNFDQYWRDSCLILAVAVAMDPRHKMKLVESTFTTIFGENAEPWIRIVEDGLHELFIDYNTEMLHFTATNGDDVDEIMLNTEPYEGPVDGSLFVDEGGLSDFEFNISDFTSMQQFKSEMDEYLEEPLLSESKEFDILSWWRENRSKYPTLSRAASDILSMSISTVSADSVFDTEVRKMDDYRSSLDSQTLEALICAKDWFQHNSITKNVSNTPRK* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0194 674 SMART bed5 27 83 - -
Mtr4g0194 674 Pfam BED zinc finger 32 75 IPR003656 GO:0003677
Mtr4g0194 674 ProSiteProfiles Zinc finger BED-type profile. 27 87 IPR003656 GO:0003677
Mtr4g0194 674 PANTHER BED FINGER-RELATED 21 667 IPR045259 -
Mtr4g0194 674 MobiDBLite consensus disorder prediction 84 110 - -
Mtr4g0194 674 Pfam Domain of unknown function (DUF4413) 420 518 IPR025525 GO:0003677
Mtr4g0194 674 MobiDBLite consensus disorder prediction 7 26 - -
Mtr4g0194 674 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 21 667 - -
Mtr4g0194 674 MobiDBLite consensus disorder prediction 1 26 - -
Mtr4g0194 674 SUPERFAMILY beta-beta-alpha zinc fingers 30 76 IPR036236 -
Mtr4g0194 674 Pfam hAT family C-terminal dimerisation region 577 659 IPR008906 GO:0046983
Mtr4g0194 674 SUPERFAMILY Ribonuclease H-like 189 660 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0194 Mtr-Chr4 2333553 2338238 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0194 - - gmx:106799409 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0194 4 2333553 2338238 Mtr4g0194 4 2333553 2338238 ECH
Mtr2g3704 2 51102596 51106037 Mtr4g0194 4 2333553 2338238 PCT