Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0190 ATGGCCCCAAAATCAGGGAAAGGAAAAACAAATAAAGCTAAGACAGAGAAGAAGAAAAAGGAGGAGAAAGCTGTGGCACCTTCTCTTGTTGACATTATTGTGGTAACTCCTTATGATTCTCAAATTGTATTGAAGGGTATCTCAACTGATAAGATACTTGATGTGAGGAAGCTATTGGCTGTGAAGGTGGAGACATGCCATTTTACAAACTATTCTTTATCTCATGAGGTTAAAGGTCAGAGATTAAATGACAGAGTTGAAGTTGTTACCCTAAAGCCATGTCTACTAAGAATGGTTGAAGAGGATTACATTGAAGAATCTCAAGCAACTACACACGTGCGAAGACTATTGGACATAATAGCCTGCACAACAAAATTCGGAAAGCCCAAACGCAACATACCAGGCCCAGACTCATCAAAGCCCAAGAAAAACGGAAAAGCCCATAATCAAAATAAGAACGGTTTGAGCCCACCGGCAACACCGAATGGAGAAACTCGGGTCGGGTCACCGACGTCGGAGCCGGCATCACCGATATCGGAGAATGTGGGAATGGTGGCGATTCATCCGACGCCGAAGTTGTCGGATTTTTATGAGTTCTTTTCGTTTTCGAATCTCACCCCTCCGATTTTGCATTTGAAGAAATGTGAACTGAAGGAAGAAGATGATAGAGGCAAAGGAGGTTACTTTCAGCTTCAGGTTAAAATCAGCAATGGGAAAGTAATTGAAGTGGTTGCTTCAGAGAAAGGCTTTTACAGTGTTGGAAAGCTGTCTCTGCAGAGTCACACATTGGTTGATCTTCTGCAACAGCTCAGCAGAGGTTTTGCTAATGCTTATGGATCATTGATGAAAGCTTTTGCGGAACGTAACAAGTTTGGCAATCTTCCTTACGGACTCCGATCAAATACGTGGCTAGTTGCTCCATCCGTTGGTGAATCTCTTTCAAACTTTCCACCTCTACCTGCTGAGGATGAAAACTGGGGTGGCAATGGTGGTGGCCAGGGAAGAAATGGAGAATACGAACGTCGACCATGGGCAACAGATTTTGAAATCTTGGCTTCTCTTCCTTCGAAAACCGAGGAGGAGAGGGTGATCAGAGACCGAAAAGCTTTTCTACTTCACAATCAGTTTGTTGATACATCGATATTTAAGGCTGTTGCAGCTATACAGGATGTGATGGAGTCCAAGTCTAGTATGAATTCTTCTCCGGGTTCTGTTATGCATCAAGATCAAGTGGGAGACTTATCCATTGTAGTTGAACGTGGTGGAAATGGAAAGTTTGATTCTACACTGAATGAATCGAGTAAGCAAAGTGACGATGTTCAGAAGAATTTAATCAAAGGGTTGTCTGCTGATGAAAGTGTCACGGTTAATGACACTTCTTCCTTGGCTGTTGTTGTTGTTCATCACTGTGGATATACAGCTACAGTTAAGGCCATTGGTAAAGCGAACACAAGGAAACCTAAAGTTCAGGATATCGAAATAGATGATCAACCTGAAGGAGGCGCAAATGCTCTTAACATCAATAGTTTGAGGGCACTGCTTCACAAATCTGGAGTTGATTCATCAGAAGGGACTTTGACTTCCTTGTCAAATTTTGATGATTTGGATGCTTCTAAATATCTTGTTAGGAAGGTGGTTGAGGAATCCATCGAAAAGATAAAGGAAGAGCCAAGTGTATCAAAACGGTCGATTCGATGGGAACTTGGTTCTTCATGGATGCAGCATCTGCAAAAACAGGAAAATTCAACCGATGGCAGTTCCAATAACAACAAGGATGGAAGTGATGTTGAGCCAGCCGTGAAAGGTCTTGGAAAGCAATTTAAATTATTGAAGAAGAGGGAAAAGAAACCAAGTGACTTAAATGGTGCAGATTCTGTGGAGCAAAATAACGATGAGCCAAATAATGATGAACCAAGCAGTTTGAATGAATTAGAGACACTACTTTCTCCAGAAGCCTTTTTGCGTCTCAAAGAATCCGGATCTGGTCTTCATCTGAAGTCAGTGGATGAGCTTATAAACATGGCACACAAGTTTTATGATGAAGTTGCCTTGCCAAAGCTGGTTACGGACTTTGGATCACTTGAACTTTCTCCTGTTGATGGTCGTACACTTACTGATTTCATGCATTTAAGAGGATTAAAGATGGGATCTTTGGGTGAAGTGGTTAAACTTTCAGAGAATCTTCCACACATACAATCACTTTGTATTCATGAGATGATTACTCGAGCATTCAAGCATTTATTTAAAGCAGTCATTGCTTCTGTAGACAATGCAGCAGATTTACCTTCAGTCATTGCGTTGACCCTGAATTTTTTACTTGGAGGGTGTCAAACTGAAGATACAGACCAAACTTTGGGTGATGATCATCATCTCAAAATTCATTGGTTACGTATGTTTTTGTCAAAAAGATTTGGATGGACATTAAAAGATGAATTTCAACATTTGAGAAAGTTATCTATTCTCAGAGGGCTCTGTCACAAGGTTGGATTAGAATTGTTCCCTAGAGATTATGACATGGAGTCCCCTAAGCCCTTTGGAAAGTTTGATATTATTAGCCTTGTTCCCGTTTGCAAGCATGTGGGATGCTCCTCAATAGACGGGCGCAATTTGTTGGAATCATCGAAAATTGCTCTTGATAAAGGAAAGCTTGAGGATGCTGTTAGTTATGGAACAAAGGCATTAGCAAAGATGATGACTGTTTGTGGTCCATATCATCGAAATACTGCAAGTGCGTATAGTCTTCTTGCTGTGGTTCTCTACCACACAGGAGATTTTAACCAGGCCACCATTTATCAGCAAAAGGCGTTGGATATAAATGAGAGAGAGCTTGGACTTGACCATCCTGACACAATGAAAAGCTATGGAGATCTTTCTGTTTTCTATTACCGTCTGCAACATATTGAGCTGGCTCTGAAGTACGTTAATCGCGCTCTCTTCCTCCTACATTTCACATGCGGTCTGTCTCATCCAAATACAGCTGCTACATATATAAATGTTGCTATGATGGAAGAAGGCATGGGAAATGTTCATGTGGCACTTCGGTACTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTGGGAGCAGATCATATACAGACTGCTGCAAGCTATCACGCCATAGCCATAGCACTTTCATTGATGGAAGCATATTCTCTGAGTGTGCAACATGAGCAAACTACACTTAAGATACTTCAGGCGAAGCTTGGCGCAGAAGATCTTCGAACTCAGGACGCGGCTGCATGGCTAGAATATTTTGAATCAAAAGCTATAGAGCAGCAAGAAGCAGCAAAAAATGGAACTCCAAAGACAGACACATCCATTGCAAGTAAAGGTCACCTTAGTGTGTCAGATCTCCTGGATTTTATTAGTCCTGACAACGATTCAAAGGGAAATGATGCTCAAAGGAAACAAAGGCGTCCAAAGATACTTCCAATAAGCGATAACAATTCTCAAGAACACGATGACACTCCAATAGTTGATGATATCGTTATTGTTGACAATGCAAAAGATGCTGCAAAAGCAGTAGAAGGCAAAATAGAAGAACCAAAAGCCAAACATGGAACAGAAGAACCCAAAAAAATTGTTGATCTCAGCATGCACAAGCCAGTGGTGACAGTTGAAGCTGTGTATGAGACATCATCTGATGAAGGTTGGCAAGAAGCCAATTCAAAAGGGCGTTCAGGTAACGCTGCTAATCGCAAGTCTGGACGCAGACAACGGCCTGTTCTATCAAAGCTCACTGTTAAAGGTTCTGATAATCACATGTACAAGGAAGCCAGTTACAGGAATGACACTACCCTGCACCAAAAAGCAGCTCCAAAAGTAGCTTCAGCTATGTTATCTCCATCTAGAAAATCAAAAACCCCAAAAGCTTTGTCATCTAAAATTTCATCAACTCCAGCATCATTGAGTTCTTTGGCCTCAAAATCTATATCTTACAAAGAAGTCGCTGCTGCACCACCAGGTACAGTTTTAAAGCCACTGTTGGAAAAAACCGAGACAGAAAAGGTAAATGATGAAAACGAGATGCCGAAAAATGAAGGTTCTGTTGAAACATCTAATGCTGATACAGTTCCACAAAAAGATGAAAAAGAACCTTCTGATGCTGATACAGATCCACAACAAGATGAATCTGAACAAGATAACTCTTCATCAGAACTTGAGAAGGTTTCCCCTTCATCTGATCAAGCAAAATCTTCTGAAACAAATGGAAGCAAGCTTTCTGCTGCAGCCAAACCTTTCAGTCCAGGAACGTTGTCTGCATCTCGCCATTTAAATCCAGTTCCTCCTGCGAGCATATACGATGCAAATGTGAGTCCAGGCATTCTTGTAGAGCCCGTTCTTCCTCCTGCTGCTGCCAGGGTCCCTTGCGGCCCTAGATCACCGTTGTATTACAGAACCAATTATACTTTCCGGATGAAACACAGTTCGACCAAGATAAGGGAAATAAGTGGATCAGGTGGTCCAAAAATTATGAATCCACATGCTCCCGAGTTTGTTCCAAGAAGTGCTTCTCAAATAGAAACTAGTGAAAAGAACAGTACTTCAAAAAACAGTCTTTCTGAATCCGAAAAGTCAGAGATAGCAAGGCAGATATTGCTGAGTTTTCTAGTGAAGTCTGTTCATCAAAATGCTGATGCCGTGGATGAGCCTAAAGTTAGTGAAGGAAAAGTTGAGAGCTTTGAAAACTCTTCTGATGAAGTAGCTAAAGACAGTGCTGTCATAAAAATAATGTACGGTACTGAGGAAAAGAATAAGACAGTGGTTAATTCCAGTGACGACAGTGAAGAGCAGGACAATTTAGATGGTGAAGGATTTGTAGTTGTCACAAACAGGAGAAAAAGCAGGCAAAAAACCACAAATGGAGTCGCTGAATTGTACAACCAGCCGTCAATTTGTGCTTCGGTTCGTTGA 4917 0.4137 MAPKSGKGKTNKAKTEKKKKEEKAVAPSLVDIIVVTPYDSQIVLKGISTDKILDVRKLLAVKVETCHFTNYSLSHEVKGQRLNDRVEVVTLKPCLLRMVEEDYIEESQATTHVRRLLDIIACTTKFGKPKRNIPGPDSSKPKKNGKAHNQNKNGLSPPATPNGETRVGSPTSEPASPISENVGMVAIHPTPKLSDFYEFFSFSNLTPPILHLKKCELKEEDDRGKGGYFQLQVKISNGKVIEVVASEKGFYSVGKLSLQSHTLVDLLQQLSRGFANAYGSLMKAFAERNKFGNLPYGLRSNTWLVAPSVGESLSNFPPLPAEDENWGGNGGGQGRNGEYERRPWATDFEILASLPSKTEEERVIRDRKAFLLHNQFVDTSIFKAVAAIQDVMESKSSMNSSPGSVMHQDQVGDLSIVVERGGNGKFDSTLNESSKQSDDVQKNLIKGLSADESVTVNDTSSLAVVVVHHCGYTATVKAIGKANTRKPKVQDIEIDDQPEGGANALNINSLRALLHKSGVDSSEGTLTSLSNFDDLDASKYLVRKVVEESIEKIKEEPSVSKRSIRWELGSSWMQHLQKQENSTDGSSNNNKDGSDVEPAVKGLGKQFKLLKKREKKPSDLNGADSVEQNNDEPNNDEPSSLNELETLLSPEAFLRLKESGSGLHLKSVDELINMAHKFYDEVALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMGSLGEVVKLSENLPHIQSLCIHEMITRAFKHLFKAVIASVDNAADLPSVIALTLNFLLGGCQTEDTDQTLGDDHHLKIHWLRMFLSKRFGWTLKDEFQHLRKLSILRGLCHKVGLELFPRDYDMESPKPFGKFDIISLVPVCKHVGCSSIDGRNLLESSKIALDKGKLEDAVSYGTKALAKMMTVCGPYHRNTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGAEDLRTQDAAAWLEYFESKAIEQQEAAKNGTPKTDTSIASKGHLSVSDLLDFISPDNDSKGNDAQRKQRRPKILPISDNNSQEHDDTPIVDDIVIVDNAKDAAKAVEGKIEEPKAKHGTEEPKKIVDLSMHKPVVTVEAVYETSSDEGWQEANSKGRSGNAANRKSGRRQRPVLSKLTVKGSDNHMYKEASYRNDTTLHQKAAPKVASAMLSPSRKSKTPKALSSKISSTPASLSSLASKSISYKEVAAAPPGTVLKPLLEKTETEKVNDENEMPKNEGSVETSNADTVPQKDEKEPSDADTDPQQDESEQDNSSSELEKVSPSSDQAKSSETNGSKLSAAAKPFSPGTLSASRHLNPVPPASIYDANVSPGILVEPVLPPAAARVPCGPRSPLYYRTNYTFRMKHSSTKIREISGSGGPKIMNPHAPEFVPRSASQIETSEKNSTSKNSLSESEKSEIARQILLSFLVKSVHQNADAVDEPKVSEGKVESFENSSDEVAKDSAVIKIMYGTEEKNKTVVNSSDDSEEQDNLDGEGFVVVTNRRKSRQKTTNGVAELYNQPSICASVR* 1639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0190 1638 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 1282 1312 - -
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 1260 1430 - -
Mtr4g0190 1638 SUPERFAMILY TPR-like 946 1064 IPR011990 GO:0005515
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 319 338 - -
Mtr4g0190 1638 ProSiteProfiles Clueless (Clu) domain profile. 322 587 IPR025697 -
Mtr4g0190 1638 Gene3D Tetratricopeptide repeat domain 868 1116 IPR011990 GO:0005515
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 622 641 - -
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 1386 1410 - -
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 1 21 - -
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 128 180 - -
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 1125 1157 - -
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 148 178 - -
Mtr4g0190 1638 ProSiteProfiles TPR repeat profile. 909 942 IPR019734 GO:0005515
Mtr4g0190 1638 Pfam Translation initiation factor eIF3 subunit 135 696 838 IPR033646 -
Mtr4g0190 1638 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1635 IPR027523 GO:0006996
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 1504 1525 - -
Mtr4g0190 1638 SUPERFAMILY TPR-like 875 978 IPR011990 GO:0005515
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 1330 1347 - -
Mtr4g0190 1638 Pfam Tetratricopeptide repeat 908 978 - -
Mtr4g0190 1638 Pfam Tetratricopeptide repeat 992 1066 - -
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 1214 1241 - -
Mtr4g0190 1638 CDD CLU-central 698 839 IPR033646 -
Mtr4g0190 1638 SMART tpr_5 993 1026 IPR019734 GO:0005515
Mtr4g0190 1638 SMART tpr_5 951 984 IPR019734 GO:0005515
Mtr4g0190 1638 SMART tpr_5 909 942 IPR019734 GO:0005515
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 613 641 - -
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 1486 1525 - -
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 1216 1235 - -
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 575 599 - -
Mtr4g0190 1638 MobiDBLite consensus disorder prediction 575 594 - -
Mtr4g0190 1638 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 1635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0190 Mtr-Chr4 2283644 2295522 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0190 K03255 - gmx:100801625 2312.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0190 4 2283644 2295522 Mtr4g0190 4 2283644 2295522 ECH