Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0187 ATGTCTAAAGAAGATGTTTTCATTGGTGCAATTGACCAAGGAACAAGCAGTAGCAGGTTCATAATATATGATAAATCAGCTCAACCAATTGGATCTCATCAGGTTGAATTCACTCAGTTCTATCCACAAGCAGGATGGGTGGAGCATAATCCAATGGAGATATTGGAGAGCGTGAAGGTTTGTATTACTAAGGCAGTGGATAAGGCAACAGCTAACGGGTTCAACGTGGACAAAGGATTGAAGGCTATTGGTCTCACCAATCAAAGAGAGACCACTCTTGTTTGGAGCAAATCCACCGGCGCTCCTCTTCACAATGCGCTTGTTTGGATGGATGTTCGTACTACCTCTGTTTGCAGGAGACTGGAAAAAGAGTTATCTGGTGGTAGAACACACTTTGTAGAGAGCTGTGGTTTGCCTATTAGCACATATTTCAGTGCTATGAAACTTCTGTGGTTGATGGAAAATGTGGATGCTGTCAAGGAAGCTATTAAGAAAAAAGATGCATTGTTTGGAACAATAGACACTTGGTTGATTTGGAACTTAACCGGTGGAGTGAAAGGAGGATTGCACGTCACTGATGCTTCAAATGCATCCCGAACAATGTTGATGAACCTAAAAACCCTCAACTGGGATGAATCTACCTTGAAAGCACTTCAAATCCCAGCTGAAATTTTGCCTAAAATTATCAGTAATTCAGAAATTATAGGCAATGTTTCTTCTGGATGGCCAGTTGCTGGTATCCCTATCGCTGGATGTTTAGGTGATCAACATGCAGCAATGCTTGGACAAGCGTGCCGTAAAGGGGAGGCTAAAAGTACTTATGGTACTGGTGCTTTCATTCTATTGAATACCGGTGAAGGAGTAGTTAAATCAAACCATGGTCTTCTGTCAACTATAGCTTATAAGCTTGGTCCGAATGCTCCAACCAATTATGCACTCGAAGGTTCTGTTGCTATTGCTGGAGCTGCGGTGCAGTGGCTTAGAGATGGTCTTGGTCTCATTACAACTGCTAAAGATATAGAGGCTCTGGCATTAGAGGTAGAATCCAATGGTGGTGTTTACTTTGTTCCTGCCTTCAATGGATTGTTTGCTCCGTGGTGGCGTGATGATGCTCGTGGGGTTTGTATCGGAATAACAAGGTATACTAGCAAGGCTCACATTGCTAGAGCCGTGCTTGAGAGCATATGTTTTCAAGTAAAAGATGTTATTGATTCAATGCACAAAGATTCTGGAGCAGATCAATCCAAGAAAGATGAGTTTTTGCTTAGGGTTGATGGTGGTGCAACTGTTAACAACCTGTTAATGCAGACTCAGGCGGATTTGTTGGCAACTTCAGTAATTAGACCAGCTGACATTGAAACAACAGCACTTGGAGCAGCCTATGCAGCTGGATTAGCTGTTGGGATTTGGAAAGAAGATTTCGTTTTCGATTCGAAGGACTTGCTGAAGAATGCTAGTGTTTTCCGTCCTCTAATGGTTGAAGAAATTAGGAAAAAGAAAGTAGATTCTTGGGGCAAAGCTGTTAGTAGATCTTTTGACTTAGCAGATCTTTCTCTTTGA 1560 0.4218 MSKEDVFIGAIDQGTSSSRFIIYDKSAQPIGSHQVEFTQFYPQAGWVEHNPMEILESVKVCITKAVDKATANGFNVDKGLKAIGLTNQRETTLVWSKSTGAPLHNALVWMDVRTTSVCRRLEKELSGGRTHFVESCGLPISTYFSAMKLLWLMENVDAVKEAIKKKDALFGTIDTWLIWNLTGGVKGGLHVTDASNASRTMLMNLKTLNWDESTLKALQIPAEILPKIISNSEIIGNVSSGWPVAGIPIAGCLGDQHAAMLGQACRKGEAKSTYGTGAFILLNTGEGVVKSNHGLLSTIAYKLGPNAPTNYALEGSVAIAGAAVQWLRDGLGLITTAKDIEALALEVESNGGVYFVPAFNGLFAPWWRDDARGVCIGITRYTSKAHIARAVLESICFQVKDVIDSMHKDSGADQSKKDEFLLRVDGGATVNNLLMQTQADLLATSVIRPADIETTALGAAYAAGLAVGIWKEDFVFDSKDLLKNASVFRPLMVEEIRKKKVDSWGKAVSRSFDLADLSL* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0187 519 Gene3D - 2 262 - -
Mtr4g0187 519 Gene3D - 264 514 - -
Mtr4g0187 519 SUPERFAMILY Actin-like ATPase domain 8 265 IPR043129 -
Mtr4g0187 519 PIRSF GlpK 5 518 IPR000577 GO:0005975|GO:0016301
Mtr4g0187 519 PANTHER SUGAR KINASE 2 515 - -
Mtr4g0187 519 Pfam FGGY family of carbohydrate kinases, C-terminal domain 270 466 IPR018485 GO:0005975|GO:0016773
Mtr4g0187 519 SUPERFAMILY Actin-like ATPase domain 265 512 IPR043129 -
Mtr4g0187 519 PANTHER - 2 515 - -
Mtr4g0187 519 ProSitePatterns FGGY family of carbohydrate kinases signature 1. 143 155 IPR018483 GO:0005975|GO:0016773
Mtr4g0187 519 Pfam FGGY family of carbohydrate kinases, N-terminal domain 8 262 IPR018484 GO:0005975|GO:0016773
Mtr4g0187 519 TIGRFAM glycerol_kin: glycerol kinase 7 512 IPR005999 GO:0004370|GO:0006072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0187 K00864 - gmx:547750 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0187 4 2258443 2262466 Mtr4g0187 4 2258443 2262466 ECH