Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0185 ATGGGTGGTGCGTGTTCTAGGAAGCAAGAGCGGGATAATGAAGATATTCTTACTAGAGGATTTTCAAGGAAATATTGCAAATGTGGGAGTTTAAAATGGTGGACATCATCGTTTTCTTATCCGTCCATGGATTTACGCACACAAAAAGGAGAATGTCCGTCACTGTTGGACTTGTGCGTCCAGAAAATAAGTGAGGATCTTGATAGACATAACACATTTTCTATGCTGCCACGGGATATAAGTCAGCAAATTTTAAATAATTTGGTCTACTCCCGACGTCTTACTGGTGATTCTCTTGAAGCATTTCGAGATTGCGCTCTCCAGGATCTATACTTGGGAGAATATGCCGGTGTTGATGATTCTTGGATGGATGTCATCTCATCTCAGGGTTCATCCTTACTCTCGGTAGATCTATCTGCGTCTGATGTCACTGATTTTGGATTGACTTACCTTCAAGATTGTCGAAGTCTCATTTCCTTAAATCTTAATTACTGTGACCAAATTTCAGATCATGGACTGGAGTGTATCAGTGGTCTGTCAAACTTGACAAGTTTGAGTTTTAGAAGAAATGATTCAATATCTGCTCAAGGAATGAGTGCCTTCTCTCGTCTTGTTAACTTGGTCAAATTGGATTTGGAGAGATGTCCTGGGATTCATGGAGGCACTGTTCATCTTCAAGGTTTAACTAAGTTGGAATCTCTCAATATGAAGTGGTGTAATTGCATAACAGATTCCGATATTAAGCCTCTATCAGAACTTGCAAGCTTGACAAGTCTAGAGATTTCATGTAGTAAAGTCACTGATTTTGGCATCAGTTTTCTGAGAGGATTGCAGAAGCTTGCCCTGTTAAATTTGGAAGGGTGCCTTGTAACATCTGCATGCTTGGATTCACTTTCAGAGCTTCCTGCGCTTTCAAACTTGAATCTTAATAGATGCAATATTTCTGACAGAGGGTGTGAAAGGTTTTCAAGACTGGAAAAGTTGAAAGTATTAAACTTGGGATTTAATGACATAGGAGATAGATGTTTAGCTCATATGAAAGGGTTGACAAAATTGGAGAGCTTGAACCTTGATTCATGTAAGATTGGCGATGAAGGATTGGAGAACTTGGCAGGTCATAAGCAATTGATCTGCTTGGAATTGTCTGATACGGAAGTTGGAAACCATGGCCTGGAGCATTTATCAGGATTGTCTAGTCTGGAGAAAATAAATCTGTCCTTCACTGTTGTTAGTGATAGTGGTTTAAGGAAATTGTGTGGACTATCATCTCTGAAGTCTCTTAATTTAGATGCTTACCAAATTACTGATGCTGGACTGGCAACCCTCACAAGTTTGACTGGCCTCACGGACCTTGATTTGTTTGGCGCTAGGATCACAGATGTTGGGACAAATTATTTGAAAAAATTCAAGAACCTGAGGTCCTTGGAAATATGCAGCGGTGGATTGACTGATGCTGGTGTGAAAAATATCAAAGAGCTTTCCTCACTAATGTGCTTAAATTTATCACAGAACAGCAACCTTACAGACAAAACTGTGGAGTTAATTGCTGGGCTCACTGCATTGGTTTCTTTGAATCTTTCAAATACTCGCATCACCTCTGCTGGACTGCAGCATTTGAAAACTCTGAAAAACTTGAGATCTCTGACATTGGAGTCATGTAAGGTGACAGCAAACGATATAAAGAAATTTAAATTAATTCACCTCCCAAACTTGGTAAGCTTTCGGCCAGAGTAG 1734 0.3985 MGGACSRKQERDNEDILTRGFSRKYCKCGSLKWWTSSFSYPSMDLRTQKGECPSLLDLCVQKISEDLDRHNTFSMLPRDISQQILNNLVYSRRLTGDSLEAFRDCALQDLYLGEYAGVDDSWMDVISSQGSSLLSVDLSASDVTDFGLTYLQDCRSLISLNLNYCDQISDHGLECISGLSNLTSLSFRRNDSISAQGMSAFSRLVNLVKLDLERCPGIHGGTVHLQGLTKLESLNMKWCNCITDSDIKPLSELASLTSLEISCSKVTDFGISFLRGLQKLALLNLEGCLVTSACLDSLSELPALSNLNLNRCNISDRGCERFSRLEKLKVLNLGFNDIGDRCLAHMKGLTKLESLNLDSCKIGDEGLENLAGHKQLICLELSDTEVGNHGLEHLSGLSSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGARITDVGTNYLKKFKNLRSLEICSGGLTDAGVKNIKELSSLMCLNLSQNSNLTDKTVELIAGLTALVSLNLSNTRITSAGLQHLKTLKNLRSLTLESCKVTANDIKKFKLIHLPNLVSFRPE* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0185 577 Pfam Leucine Rich repeat 154 177 IPR001611 GO:0005515
Mtr4g0185 577 Pfam Leucine Rich repeat 229 251 IPR001611 GO:0005515
Mtr4g0185 577 Pfam Leucine Rich repeat 398 419 IPR001611 GO:0005515
Mtr4g0185 577 Pfam Leucine Rich repeat 180 202 IPR001611 GO:0005515
Mtr4g0185 577 Pfam Leucine rich repeat 302 362 IPR001611 GO:0005515
Mtr4g0185 577 Pfam Leucine rich repeat 471 531 IPR001611 GO:0005515
Mtr4g0185 577 PANTHER UNCHARACTERIZED 2 534 - -
Mtr4g0185 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 4-LIKE 2 534 - -
Mtr4g0185 577 SMART LRR_CC_2 180 204 IPR006553 -
Mtr4g0185 577 SMART LRR_CC_2 154 179 IPR006553 -
Mtr4g0185 577 SMART LRR_CC_2 301 325 IPR006553 -
Mtr4g0185 577 SMART LRR_CC_2 493 518 IPR006553 -
Mtr4g0185 577 SMART LRR_CC_2 519 542 IPR006553 -
Mtr4g0185 577 SMART LRR_CC_2 422 445 IPR006553 -
Mtr4g0185 577 SMART LRR_CC_2 228 253 IPR006553 -
Mtr4g0185 577 SMART LRR_CC_2 397 421 IPR006553 -
Mtr4g0185 577 SMART LRR_CC_2 349 373 IPR006553 -
Mtr4g0185 577 SUPERFAMILY RNI-like 296 564 - -
Mtr4g0185 577 Gene3D Ribonuclease Inhibitor 300 373 IPR032675 -
Mtr4g0185 577 Gene3D Ribonuclease Inhibitor 87 220 IPR032675 -
Mtr4g0185 577 Gene3D Ribonuclease Inhibitor 478 571 IPR032675 -
Mtr4g0185 577 Gene3D Ribonuclease Inhibitor 374 457 IPR032675 -
Mtr4g0185 577 Gene3D Ribonuclease Inhibitor 221 299 IPR032675 -
Mtr4g0185 577 SUPERFAMILY RNI-like 107 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0185 Mtr-Chr4 2233083 2243831 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0185 121 427 Receptor kinase-like Gene Family AT5G51350 26.452 1.96e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0185 - - gmx:100795219 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0185 4 2233083 2243831 Mtr4g0185 4 2233083 2243831 ECH