Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0182 ATGGATTGGTTTTCTTGGCTTTCAAAAACAAACCTTGATCCATCTCTTGTGTATGAGTATGGTCTCACTTTTGCACACAATGAGCTAGAACAAGAAGACATGGTTTACTTCAACCATGAATTTCTCCAAAGCATGGGAATCTCCATAGCCAAACACAGGCTAGAAATTCTCAAACTTGCAAGAAAAGAAAAAGCAAAGAGACAACCACCAAGACCAATGGCAAAGATCATGGGAGCAATCAAAAAGACAAAAAAGTGCTTAGGTAACTACATAATGAGAAAGTTGGTTACATGTGAAGAATCAAATTCAGCACTTGTTGTAGTTCCAACATCAAGGGCTAGTAGTAGTAGTTATTATGGAACAAGATCATCATGGAAGAATTCTGTGGTGAAGAGGAATAAGAAGTTGAAGGTGGATAAACAAGAGAGACTGTTGCTTACAAATGGAAGCCCTAGTCCTTCAATGATGCCTGCTCTTGCTCTTGATAGTTTTTGTAGTACTCCTATGGTTTATCATTTTCATGAAGGAAAGATGAAAGGAGATGATCATAACAACAATGGTTATTGGTCAGCTGCTGTTGAAGATATCAGGTGGGATACTATGTTCCAAGATCTAAAGCCAAACTAA 627 0.378 MDWFSWLSKTNLDPSLVYEYGLTFAHNELEQEDMVYFNHEFLQSMGISIAKHRLEILKLARKEKAKRQPPRPMAKIMGAIKKTKKCLGNYIMRKLVTCEESNSALVVVPTSRASSSSYYGTRSSWKNSVVKRNKKLKVDKQERLLLTNGSPSPSMMPALALDSFCSTPMVYHFHEGKMKGDDHNNNGYWSAAVEDIRWDTMFQDLKPN* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0182 208 CDD SAM_superfamily 2 62 - -
Mtr4g0182 208 Gene3D - 1 68 IPR013761 -
Mtr4g0182 208 PANTHER OSJNBA0033G05.11 PROTEIN 1 208 - -
Mtr4g0182 208 PANTHER OSJNBA0033G05.11 PROTEIN 1 208 - -
Mtr4g0182 208 SUPERFAMILY SAM/Pointed domain 5 68 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0182 Mtr-Chr4 2189541 2190831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0182 - - pvu:PHAVU_010G157800g 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0182 4 2189541 2190831 Mtr4g0182 4 2189541 2190831 ECH
Mtr2g3712 2 51167588 51168852 Mtr4g0182 4 2189541 2190831 PCT