Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0163 ATGGCGCTTCTTCTCCGTCTCAAAACCACAAAACCCAAACCCTACTCTTCACCACTCCACCACCTCTTCTCCACCTCCAACTCCGGCGACAATGACGGCGGCGACGGCGACAAAAGACCCTCCTTCTCCGAGTCCTTACGCCAAGTCAGAAGCTCATTCAAACAACAACCAACCTCAAACACAACACCTTCCCCTCTCTCTCCCTCGAAACAAAGCGAATCCTCTGTTGATATCATGAGCAAAATCCAAAGCTTCCGTTACAAAACCACCGTACCTGATTCCGATGATCTATTAACTCAGAAGAAGACAATCTCGTTTCAGGATATGTATAGTAGAATGCATAATCGATCCAAAGATTCCGCTGCGAATATTGGTTCGGATTCGTCGAAAACTACCATTGGTGGTGGTGGGATTGGACTTGATGTGATTCGTGGAAGTTTAAATCAGCTGAAAAATGCGCCGAATCAGACTCCGGTGACGCCGAGGTGGAGACCGAATATGTCGCCGGGGAATAGTGGGACGAGTTTGTTACCAGATTCAATGTTTGGGAAGGAGATAAGGGATAGGTTAGCGAAGGTGAATGATTCAGGGAGTTTTGGTACTGTTAGGTTATATATGCATGATGAATTGGGTGAGAAATTGAAGAATTTGAGGCCTCAAGTGAAAGGAAAAGATTGGTTTTCAATTGCTGAGTTGAGTGAGAGGTTGAAGAAAGTGAGGGAAATGGATGAAATTGATGCTAAATCGAGTAAATCTAGTGCTGATACAAATCAAGTGTTTAACATTTTGAAAGATTCTGTTCAACATATCAAAGCTAAAGAAGCCGAGAAACCCAAAGCTTCATTGCAGAGAATTGATATGTTGTCCCTGATTGGCGGGACTCCAAGCTACCTGTCAAAGCCTCCTAAAGAGCATCTTGTTGAAAAGTATTTTCATCCGGATAACATGTCCTCTGCCGAAAAGTTGAAAATTGAGCTCACAAAGGTTAGAGATGAATTTAAGATGTCCGAGTCAGATTGTGGCTCTGCTCGTGTTCAAGTTGCGACACTCACAACCAAGATTAAGCATCTATCATCAGTTCTACACAAGAAGGATGTGCATTCTCGGAAAGGTCTGATAGCAATGGTTCAAAAGAGGAAAAAGTTGCTGAAATACCTCAGAAGAACCGACTGGGATTCCTATTGTTTTGTTCTCTCTAAGTTAGGTCTACGTGATAATCCAGAATATACTTATAAAGCCCGGACTGGTAAATCGGGTGACGTAGCCAATTAA 1272 0.4316 MALLLRLKTTKPKPYSSPLHHLFSTSNSGDNDGGDGDKRPSFSESLRQVRSSFKQQPTSNTTPSPLSPSKQSESSVDIMSKIQSFRYKTTVPDSDDLLTQKKTISFQDMYSRMHNRSKDSAANIGSDSSKTTIGGGGIGLDVIRGSLNQLKNAPNQTPVTPRWRPNMSPGNSGTSLLPDSMFGKEIRDRLAKVNDSGSFGTVRLYMHDELGEKLKNLRPQVKGKDWFSIAELSERLKKVREMDEIDAKSSKSSADTNQVFNILKDSVQHIKAKEAEKPKASLQRIDMLSLIGGTPSYLSKPPKEHLVEKYFHPDNMSSAEKLKIELTKVRDEFKMSESDCGSARVQVATLTTKIKHLSSVLHKKDVHSRKGLIAMVQKRKKLLKYLRRTDWDSYCFVLSKLGLRDNPEYTYKARTGKSGDVAN* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0163 423 Pfam Ribosomal protein S15 328 404 IPR000589 GO:0003735|GO:0005840|GO:0006412
Mtr4g0163 423 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 421 - -
Mtr4g0163 423 SMART Ribosomal_S15_2 326 404 IPR000589 GO:0003735|GO:0005840|GO:0006412
Mtr4g0163 423 Coils Coil 319 339 - -
Mtr4g0163 423 MobiDBLite consensus disorder prediction 151 179 - -
Mtr4g0163 423 Hamap 30S ribosomal protein S15 [rpsO]. 316 405 IPR005290 GO:0003735|GO:0005840|GO:0006412
Mtr4g0163 423 Gene3D - 323 405 - -
Mtr4g0163 423 TIGRFAM S15_bact: ribosomal protein uS15 327 404 IPR005290 GO:0003735|GO:0005840|GO:0006412
Mtr4g0163 423 CDD Ribosomal_S15p_S13e 325 402 IPR000589 GO:0003735|GO:0005840|GO:0006412
Mtr4g0163 423 SUPERFAMILY S15/NS1 RNA-binding domain 326 405 IPR009068 -
Mtr4g0163 423 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 421 - -
Mtr4g0163 423 MobiDBLite consensus disorder prediction 45 76 - -
Mtr4g0163 423 MobiDBLite consensus disorder prediction 151 178 - -
Mtr4g0163 423 MobiDBLite consensus disorder prediction 7 76 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0163 - - cam:101488736 461.455