Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0159 ATGTTATTGAAAGATTTTCCTCAAGAATGTTGGGAATCAATCTTCAAATTCCTTGGCCAAGGAAAAGATTTGGAGTCTGTTTCTATGGTCTGCAAGAAATTCCTTTCCATTACAAACCAAGTGAAATTTTCTTTAACAATACATGATTCCACTATTCTATTCCTTTCTCGGCTACTCTCGAGATTTTTAAGGCTCAAAGCCATAGATTTTAGTCACTTCAATGGTGAACTAGAAGACATCCTTCATCAAATTTCACAATCTGGGTTGGACCTTGATTTGATTAATCTTTCCAACCAAAGAACACTTCCTGTTGATGGATTGCGAGAACTCGGTACAAAGATGATAAACTTGAGGGTTTTGATTTGCTCGAACGTTGGATCTCTTCGCGATAGCCATCTGAACTGCAGATCATTGGAAGAAATTTCATTCTTCCAATGCTTCAAGATATCCCAAGATGGAATTGCTTCTGCTATCCGAATGAGGCCAAGTTTGTCTTCCATTTCTTTTAACATCGAAAAGAAAAGAATACATGGACCTGGTTTGACTCCCTTACCTATTAACTTGGATTTGATCGATTCATTCGTGAGCTTGAAAAGATTAAATGCTATTGATTTATCAAATTCTTTTATATCGGATGAGTTTCTTATCTCAGTCGCAGACGGTGCTGTTAATTTTCTGAAAAAACTTGTCCTTCAAGACTGTTGCAACTTTACATTTTCAGGAATATTTTATGTTTTATCCAAATGTCAATATGTTCAATCCTTAGATCTTCGTAAAGCCGACTTTCTAACTGATCAATGTATCAACAAGTTATCGATATTTCTTATTAACTTGACCTCTATAAACCTTAGTGGTTGTTGCCAGCTAACGAACTCAACCTTTTTCATACTCACAAGAAATTGTCCCTTGCTACTTGAGATCAAAATGGAGAGAACGTATATCGGGGTAGAAGGTGAGGAAGATTCCAATTCCATGTCAGATTTTGTCGTCAACCGTCAAGTAAAAGCGGTTCATTTGGGTGATAATATTTTACTGAATGATGCTAGTTTAATCAAATTCACTTCCATTTGCGCTGGTTTACAACTTCTTGACTTAAATGCATGTGAAGGTATCACTGGAGAATGTGTTGCCGAGGTTATGAAAAGATGCTATGTGATAAGGCACTTAAACATTGCATATACAGGAATTGAAAAATTTGAAATAAACTTTGAAGTTTCCCAATTGAAGGTGTTGAACTTGTCAGGAGCAAGAATTGAAGATGAATCACTCTCAATAATCTCAAAGTGGTGCAGTGGACTAATGTTATTGGACATTCAAAATTGTTGGTATGTTACAGCTAAGGGAGTAAGGGAAGTAATAGAAAATTGCATAGCATTGAAAGAGTTAAATTTGAGGAATTGCAGTTTGGTGGATGATGATTTTGTTTGTGGACTAATGCATGCAAGGCCTTCCTTGAGAAAAATAATCACTCCTTCTGGTGTTGATTTTTATGGTTGA 1497 0.3594 MLLKDFPQECWESIFKFLGQGKDLESVSMVCKKFLSITNQVKFSLTIHDSTILFLSRLLSRFLRLKAIDFSHFNGELEDILHQISQSGLDLDLINLSNQRTLPVDGLRELGTKMINLRVLICSNVGSLRDSHLNCRSLEEISFFQCFKISQDGIASAIRMRPSLSSISFNIEKKRIHGPGLTPLPINLDLIDSFVSLKRLNAIDLSNSFISDEFLISVADGAVNFLKKLVLQDCCNFTFSGIFYVLSKCQYVQSLDLRKADFLTDQCINKLSIFLINLTSINLSGCCQLTNSTFFILTRNCPLLLEIKMERTYIGVEGEEDSNSMSDFVVNRQVKAVHLGDNILLNDASLIKFTSICAGLQLLDLNACEGITGECVAEVMKRCYVIRHLNIAYTGIEKFEINFEVSQLKVLNLSGARIEDESLSIISKWCSGLMLLDIQNCWYVTAKGVREVIENCIALKELNLRNCSLVDDDFVCGLMHARPSLRKIITPSGVDFYG* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0159 498 SUPERFAMILY RNI-like 229 488 - -
Mtr4g0159 498 SMART LRR_CC_2 135 160 IPR006553 -
Mtr4g0159 498 SMART LRR_CC_2 249 274 IPR006553 -
Mtr4g0159 498 SMART LRR_CC_2 223 248 IPR006553 -
Mtr4g0159 498 SMART LRR_CC_2 197 221 IPR006553 -
Mtr4g0159 498 SMART LRR_CC_2 456 481 IPR006553 -
Mtr4g0159 498 SMART LRR_CC_2 357 382 IPR006553 -
Mtr4g0159 498 SMART LRR_CC_2 275 300 IPR006553 -
Mtr4g0159 498 SMART LRR_CC_2 430 455 IPR006553 -
Mtr4g0159 498 SMART LRR_CC_2 405 429 IPR006553 -
Mtr4g0159 498 SUPERFAMILY F-box domain 3 39 IPR036047 GO:0005515
Mtr4g0159 498 Gene3D Ribonuclease Inhibitor 183 315 IPR032675 -
Mtr4g0159 498 Gene3D Ribonuclease Inhibitor 1 182 IPR032675 -
Mtr4g0159 498 PANTHER NODULIN-LIKE PROTEIN 265 482 - -
Mtr4g0159 498 PANTHER NODULIN-LIKE PROTEIN 5 260 - -
Mtr4g0159 498 PANTHER UNCHARACTERIZED 5 260 - -
Mtr4g0159 498 PANTHER UNCHARACTERIZED 265 482 - -
Mtr4g0159 498 SUPERFAMILY RNI-like 52 315 - -
Mtr4g0159 498 Gene3D Ribonuclease Inhibitor 316 400 IPR032675 -
Mtr4g0159 498 Gene3D Ribonuclease Inhibitor 401 490 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0159 Mtr-Chr4 1879824 1881794 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0159 K10268 - gmx:100811565 644.425