Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0153 ATGCGACGCGCTGCATCAAAGAAAACGGGTCAATCCAATTCCAATCCCTCCGCCGCTGATCTCTTCCGCTCCGCTTCGAGTAAAGCAAACTCAAAGGAACTGGAGAGAATTGATAGTCTATTTTATTCATATGCCAATGGATCTTCCGGGTTGATTGACCCAGAAGGAATTGAAGCACTTTGTGCTGATATGGAGGTGGATCATACTGATTTGAGGATTTTGATGCTTGCGTGGAAAATGAAATCTGAGGAGCAAGGATATTTTACCGTGGACGAGTGGAGGAGAGGCTTAAAAGCACTAAGGGCTGATACAGTAAGTAAATTGAAGAAGGCACTACCAGACCTAGAAAAGGAGGTCCGGAGGCCGTCAAATTTTTCAGATTTCTATTCTTATGCTTTCCAATATTGTCTAACCGAGGAGAAACAGAAAAGCATTGATATAGAGAGCATTTGTGAATTACTTTCTCTTGTTTTGGGTTCAACATTTCCAGCTCAAGTCAGCTTATTTGTGGAATATTTGAAGAATCAAAATGATTACAAGGTCGTAAACATGGATCAGTGGATGGGATTTTTCCGGTTTTGCAACGAGATAAGTTTTCCATCGCTTAGTGACTATGATCCCGAACTTGCGTGGCCTTTAATCCTGGATAATTTCGTTGAATGGTTGCGAGAAAAGAAAAAAATCTGA 687 0.4119 MRRAASKKTGQSNSNPSAADLFRSASSKANSKELERIDSLFYSYANGSSGLIDPEGIEALCADMEVDHTDLRILMLAWKMKSEEQGYFTVDEWRRGLKALRADTVSKLKKALPDLEKEVRRPSNFSDFYSYAFQYCLTEEKQKSIDIESICELLSLVLGSTFPAQVSLFVEYLKNQNDYKVVNMDQWMGFFRFCNEISFPSLSDYDPELAWPLILDNFVEWLREKKKI* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0153 228 Pfam Cullin binding 107 221 IPR005176 -
Mtr4g0153 228 SUPERFAMILY EF-hand 27 190 IPR011992 -
Mtr4g0153 228 MobiDBLite consensus disorder prediction 7 21 - -
Mtr4g0153 228 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 3 226 - -
Mtr4g0153 228 MobiDBLite consensus disorder prediction 1 21 - -
Mtr4g0153 228 Gene3D Cullin, PONY binding domain 122 228 IPR042460 -
Mtr4g0153 228 ProSiteProfiles DCUN1 domain profile. 32 223 IPR005176 -
Mtr4g0153 228 Gene3D - 30 120 - -
Mtr4g0153 228 PANTHER RP42 RELATED 3 226 IPR014764 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0153 Mtr-Chr4 1810150 1814881 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0153 K17824 - gmx:100776788 427.172