Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0152 ATGGAAGAGAAGAAAAAACATCGTCGGAGAATGTTACTATGTGGAAAAGTTTCACGAAACGGTGTTGTTTCGGGATCGGTGCCGGTGTATCTTAACGTGTACGATCTGACACAATTCAACGGTTATGCTTACTGGTTTGGTCTTGGTGTTTATCATTCTGGTGTTCAAGTTCATGGTGTTGAATATGCATTTGGTGCACATGAGTATGCATCAACAGGGATATTTGAAGGAGAACCAAAAAAGTGTGAAGGATTCAGATTTAGGAAGACAATAATGATTGGAAAAACAGATATGGAAATTGGTGAAGTGAGAAGTGTGATGGAAGAACTTGCTGCGGAGTACAAAGGAAATGCTTACAATCTCATTACAAAAAATTGTAACCATTTTTGTAATGATGCTTGTGTTAAGCTCACTGGAAATTCTATACCTAGTTGGGTTAATCGTCTTGCTAGAATTGGTTTTATGTGCAATTGTGTTCTTCCCGTGACATTGAACTCAACAAAAGTTAGACATCATCATCATAGAATAGAAGACAAACAATGTGAAGATGATAAACTACTCAAACAAGCACTGACAAGTGAACCAAACAAAGTTAATGTTTCAAGTTCAACACCTTCAAGAGCATCTTCACCGGCTTCTTCTAGCTCTGGATTAAGACGGGGAAGGAGTAGGACAAGACGTCCTCCACCTTCACCTTTGATTATTGCATCCCCTTCATCTTGA 723 0.3873 MEEKKKHRRRMLLCGKVSRNGVVSGSVPVYLNVYDLTQFNGYAYWFGLGVYHSGVQVHGVEYAFGAHEYASTGIFEGEPKKCEGFRFRKTIMIGKTDMEIGEVRSVMEELAAEYKGNAYNLITKNCNHFCNDACVKLTGNSIPSWVNRLARIGFMCNCVLPVTLNSTKVRHHHHRIEDKQCEDDKLLKQALTSEPNKVNVSSSTPSRASSPASSSSGLRRGRSRTRRPPPSPLIIASPSS* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0152 240 Gene3D PPPDE domains 23 182 IPR042266 -
Mtr4g0152 240 PANTHER F23A5.4 PROTEIN 18 240 - -
Mtr4g0152 240 SMART DUF862_2a 27 165 IPR008580 GO:0008233
Mtr4g0152 240 ProSiteProfiles PPPDE domain profile. 27 164 IPR008580 GO:0008233
Mtr4g0152 240 MobiDBLite consensus disorder prediction 192 240 - -
Mtr4g0152 240 Pfam PPPDE putative peptidase domain 28 161 IPR008580 GO:0008233
Mtr4g0152 240 MobiDBLite consensus disorder prediction 192 219 - -
Mtr4g0152 240 PANTHER DESUMOYLATING ISOPEPTIDASE 18 240 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0152 Mtr-Chr4 1802952 1806516 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0152 K22763 - gmx:100796813 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0152 4 1802952 1806516 Mtr4g0152 4 1802952 1806516 ECH