Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0094 ATGGCTGCTACTACTGCTGTTGGTGTTATTGGTGGTAATGGATCTTCATGGATGCAATTTGGTAGAAAGGAAAAGAAACAAAATAAGATGAATAAAGTTAGGGTTTGTTGCTCTAAATCTAAATCTAAATCTAAATCTTCTTCTGTGATGGATCCTTATAAGACTTTAAGAATTCAACCTGGTGCTTCTGAATCTGATGTTAGAAAGGCTTTTAGACAACTTGCTTTGCAGTACCATCCTGATGTGTGCAAAGGAAGAGATTGTGGGGTGCAGTTTCACTTGATCAATGAGGCTTATGATATTGTGATGTCCAATTTGAGAGAAAATGTGATAGAAACTTATGAGACCACTACCACATATAATGAGAACAATGATGAGTCATTTAGAGGAATGAATGATCCAGATTGGGGCTATTGGGAAGAATGGATGGGTTGGGAAGGAGCAGGAATCCGTGACTACTCTTCTCATATTAATCCTTACATTTAA 486 0.3724 MAATTAVGVIGGNGSSWMQFGRKEKKQNKMNKVRVCCSKSKSKSKSSSVMDPYKTLRIQPGASESDVRKAFRQLALQYHPDVCKGRDCGVQFHLINEAYDIVMSNLRENVIETYETTTTYNENNDESFRGMNDPDWGYWEEWMGWEGAGIRDYSSHINPYI* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0094 161 ProSiteProfiles dnaJ domain profile. 51 115 IPR001623 -
Mtr4g0094 161 Pfam DnaJ domain 51 104 IPR001623 -
Mtr4g0094 161 PANTHER CO-CHAPERONE PROTEIN DJLA 4 161 - -
Mtr4g0094 161 PANTHER HEAT SHOCK PROTEIN BINDING PROTEIN 4 161 - -
Mtr4g0094 161 Gene3D DnaJ domain 34 132 IPR036869 -
Mtr4g0094 161 PRINTS DnaJ domain signature 53 71 IPR001623 -
Mtr4g0094 161 PRINTS DnaJ domain signature 71 86 IPR001623 -
Mtr4g0094 161 PRINTS DnaJ domain signature 87 107 IPR001623 -
Mtr4g0094 161 CDD DnaJ 51 101 IPR001623 -
Mtr4g0094 161 SUPERFAMILY Chaperone J-domain 47 147 IPR036869 -
Mtr4g0094 161 SMART dnaj_3 50 107 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0094 Mtr-Chr4 1103295 1104878 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0094 - - mtr:MTR_4g007300 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0094 4 1103295 1104878 Mtr4g0094 4 1103295 1104878 ECH