Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0084 ATGCTACTATCCATGGCTATGGCTATGTCATCTCTACCTCACAACCTCACCTTTCTACCTTCACATCTTTCTCCACTATCTTCTTCAATTTCTACTACTAAATCTCTTCGAAACACTTCTTTATTCAAAATCAAATGCATTAAAACTGAAAGAGAAGCTTCTTCATCAGACCCAAATCGAGGTTTCGATCCTAAATCAGGTGTATCTGTTTATAAACCTAAGTCTTATGAAGTTCTCGCCACTGATGCTGCTAATTCACTCAATTTTGCTCTTCAAGATGGAAAACTGAGAATCGAAATCGATTTCCCGCCCTTGCCCAGCAACATTTCTTCATATAAGGGATCTTCAGATGATTTCATCGATGCCAACATTCAACTTGTCTTAGCTGTTGTAAAAAAGCTCCAGGAGAAAAAAGAGACCAGAGCTTGCGTAGTATTCCCTGATAAACCAGAAAAGCTTCGAGCCTCTCAGTTGTTCAAAGCAGCTCTGGATTCAGTTGATGGCCTTACTATAGGCTCCTTAGATGATATCCCTGCAGGACCCGTGGCTTCATTTTTCAGATCTGTTAGAAACACCCTTGATTTTGACTTTGAAGATGAGAATGAAGGTCGTTGGCAGTCTAGTGAACCTCCATCGCTCTACATATTCATTAATTGCAGTACACGTGAACTTGGTTATATTGAGAAGTATGTGGAAAAATTTGCTCCATCAACCCCAACACTTTTATTTAATCTTGAGCTAGATACACTGCGTGCTGATTTAGGCCTTCTAGGCTTCCCACCCAAAGATTTGCAATACCGCTTTCTTTCTCAATTCACTCCAGTATTCTACATTCGGATCAGAGATTATTCAAAGACAATTGCAGTAGCACCTTATATTGTCAATTACAGTGGAGCTGTGTTCCGCCAATACCCTGGTCCCTGGCAGGTGATGCTTAAGCAAGCTGATGGTTCTTATGCGTGTGTAGCAGAAAGTGCAACTCGCTTCACCCTTGGTGAAGCCAAAGAAGAACTGTTGAGGGTCCTTGGACTTCAAGAAGAAGTGGGAAGCTCTCTAGAATTTCTACGAAGAGGCTATAGGTCAAGCACATGGTGGGAAGAAGATTCTGAATTGGAAGTATCTTCTGCATGGCGGACCTGA 1140 0.4167 MLLSMAMAMSSLPHNLTFLPSHLSPLSSSISTTKSLRNTSLFKIKCIKTEREASSSDPNRGFDPKSGVSVYKPKSYEVLATDAANSLNFALQDGKLRIEIDFPPLPSNISSYKGSSDDFIDANIQLVLAVVKKLQEKKETRACVVFPDKPEKLRASQLFKAALDSVDGLTIGSLDDIPAGPVASFFRSVRNTLDFDFEDENEGRWQSSEPPSLYIFINCSTRELGYIEKYVEKFAPSTPTLLFNLELDTLRADLGLLGFPPKDLQYRFLSQFTPVFYIRIRDYSKTIAVAPYIVNYSGAVFRQYPGPWQVMLKQADGSYACVAESATRFTLGEAKEELLRVLGLQEEVGSSLEFLRRGYRSSTWWEEDSELEVSSAWRT* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0084 379 Pfam Domain of unknown function (DUF1995) 73 335 IPR018962 -
Mtr4g0084 379 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 27 379 - -
Mtr4g0084 379 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 27 379 IPR044687 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0084 - - aip:107617195 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0084 4 1008998 1016166 Mtr4g0084 4 1008998 1016166 ECH