Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0069 ATGGCTTCTTCTGATGACAGAGATACAGTAGTGAAGAGTCTTAGACATTTGGGGAGAAAACTATCCAAAAATCTAGCTTCTTCTGTTGATATTCTTCTTGAATTACTTGATAAAATGGAGCTGTTATTGTTAAACTTGGATCAAAATCCACCTGAGCCAATTCAAGAATCACTTGTACTTCCAATGAAGACACTGATTTCTGATGAGCTTTTGAAACACACAGACGAAGATGTTAAGATTTCAGTCACAGCTTGCCTCACTGAGATTGCAAGAATCACAGCACCAAATGATCCTTATGATGATGAAAATATGAAGGAATTTTTTAAGCTTACAGTAGCAGCTTTTGAAAATTTGTCCCATGTATCTGGCCGCAGATATGAAAAAGCACTTACCATACTTGAAAAAATTTCAAAGATCAAAATATTCTTGATCATGCTGGACCTTGAGTGCGATGACCTGGTTATTGAGATGTTTCAACAGTTCTTGAGAATCATAAGGTCAAACCATCCAAGTAGTGTAATTGAATCAATGGAGATAGTAATGACCGGGATACTCGACGAAAGTGAAGACATTTCCTCGGATCTACTTAGGCCTTTATTAGATAGTGTAAGAAAGGAGAACCAGACGATTTCACCTATTTCTTGGACTTTGGGGGAGAAAGTAATCACCAATTGTGCTGTCAAACTTAAACCTTATCTCATGAAAGCAGTTGAATCATCAGGCAGAGCTCTCAATGAGTATGCGGAAACAATAACTTCCATTTGCCACAATAAATCTGAATCCCCAGAACGTAATCATTCGATGGCGGTTCAGGATGTTGAGAACAATCTTGATATACCTAAAGATGCTCCTGAAGAACCCTGTGACGTGACTACAGGGGTTGAAATGGATAATACTTGTGTGAGAGATGTCCAAATTACGGATGAGACAAAGTCGGATATAAGAAGTACCAATGCAGCTACAGTCGACGATGAAGTTACAAAAAGTTCTGATTCAAAAAGGAAACTACATTCTTGTCCAACTACAAACTCCGAAAGACGGAATGCAAAAACTAGTTCTGAAACTGGCAATTTAGAGTCAGATCAGGAACTGAACTCCAAAACTCAGCTGGATACTGTGCCAAGGAAGAGGGCACGTAAGCCTAACTCCTTAATGAATCCCGAGGAAGGCTATAATCACTCTTTTGTTCATAAGCAGTCAAGTACTAGAAAATCATCTCAATCCAACAAAAAGGCTCATGATGACAGCTATGCTCTTTCACCATCTGATAACCCTTCTTCCAGAAAGGATAAGACGCAGTCAAAGCCTGAAACTGTCGGTGAAGCTCCAGTTTCTGATCTTAAAAATGTGAAGATTGCAAAATCGGCTAAATCCAAAAAAACTTGTGATATGAGTGGTAATGGTCCATCTATTGAAAGTCTTGATTCTACCAAGAGTATTAGACCATCAAATCCTGAAGGTATGACCAAAACTCCTGAAGCTCTAGTTTCTGATCTTAAAAATGGGAAGATTGCAAAACCTGCTAAATCCAAAAAAGACTGTGATAAAAGTAGTGATGTTCCGTGCATTGAAAGTCCTGATTCTACCAAGGGTATTAGAACGTCAAATCCTGAAGGTATGAGCAAAACACCAGAAGCTTTAGTTTCGGAATCTAAACAAGGAGAGAATAGAAAAGATGTTCCCTTTACAAAGGATATCATTCATGAAGGAAGCTCTACCAAACAACGCCGGAGAAGGAAAATTAGTAGCATTGGGGATCAAAATGATCACCCTAATTCTGCGTCAATATTGAAGGATGATAATTTGAATCCTTCACATAAGAAGACTTCTGTTGAATCCCATGGTGTTCGGAAGAAAAATAAATCTAAAGTACGGAAGGATTCTGAAGAGAAACATTTGAAGGATGATAATTTGAATCCTTCACATAAGAAGACTTCTGTTGAATCTCATGGTGTTGGGAAGAAAAATAAATCTAAAGTAAGGAAGGATTCTGAAGAGAAACATGAGGCACCCGTTGGAAAAATCAAATTATGTATAAAGTTTGATGGAAAAGTTGTCGTGCCTCCTCAATCAATAGTTGCTAAGGTGGAATCTGAGGTTCTTTGTGAAGATGAGAAGAAACACAAGTCGAGTACAAATACTAAGGTAGAAAATAGAGCAGAGGGAGGATCCTCAGCTCAAATAGAAGTCGACAAAAGGAAAAGAAAAACTTCTACTTCTGATAAAGGTGTCAACAAATCATCTGCTAAGAAGGCACAAGAATCTGAAGACCTTGGTAACTCATTGGTTGGTAAAAGGATCAAGGTCTGGTGGCCATTAGACAAGACATATTATGAAGGTGCTGTCAGTGCTTATGATCATGTCAACGGAAAGCACAAGGTGTTGTATGACGATGGCGTTGAGGAACAGATAAATCTCAAGAAACATCGCTGGGAACTAGCTGATGTTAATGTTTCACCAGATAAGGGCAGAAAAAAACGTAGAAAAAGCCAAGTTGAAGTCTCTTAA 2508 0.3836 MASSDDRDTVVKSLRHLGRKLSKNLASSVDILLELLDKMELLLLNLDQNPPEPIQESLVLPMKTLISDELLKHTDEDVKISVTACLTEIARITAPNDPYDDENMKEFFKLTVAAFENLSHVSGRRYEKALTILEKISKIKIFLIMLDLECDDLVIEMFQQFLRIIRSNHPSSVIESMEIVMTGILDESEDISSDLLRPLLDSVRKENQTISPISWTLGEKVITNCAVKLKPYLMKAVESSGRALNEYAETITSICHNKSESPERNHSMAVQDVENNLDIPKDAPEEPCDVTTGVEMDNTCVRDVQITDETKSDIRSTNAATVDDEVTKSSDSKRKLHSCPTTNSERRNAKTSSETGNLESDQELNSKTQLDTVPRKRARKPNSLMNPEEGYNHSFVHKQSSTRKSSQSNKKAHDDSYALSPSDNPSSRKDKTQSKPETVGEAPVSDLKNVKIAKSAKSKKTCDMSGNGPSIESLDSTKSIRPSNPEGMTKTPEALVSDLKNGKIAKPAKSKKDCDKSSDVPCIESPDSTKGIRTSNPEGMSKTPEALVSESKQGENRKDVPFTKDIIHEGSSTKQRRRRKISSIGDQNDHPNSASILKDDNLNPSHKKTSVESHGVRKKNKSKVRKDSEEKHLKDDNLNPSHKKTSVESHGVGKKNKSKVRKDSEEKHEAPVGKIKLCIKFDGKVVVPPQSIVAKVESEVLCEDEKKHKSSTNTKVENRAEGGSSAQIEVDKRKRKTSTSDKGVNKSSAKKAQESEDLGNSLVGKRIKVWWPLDKTYYEGAVSAYDHVNGKHKVLYDDGVEEQINLKKHRWELADVNVSPDKGRKKRRKSQVEVS* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0069 835 MobiDBLite consensus disorder prediction 522 550 - -
Mtr4g0069 835 MobiDBLite consensus disorder prediction 551 572 - -
Mtr4g0069 835 PANTHER SISTER CHROMATID COHESION PDS5-LIKE PROTEIN 505 829 - -
Mtr4g0069 835 PANTHER SISTER CHROMATID COHESION PDS5-LIKE PROTEIN 12 460 - -
Mtr4g0069 835 MobiDBLite consensus disorder prediction 275 294 - -
Mtr4g0069 835 MobiDBLite consensus disorder prediction 698 715 - -
Mtr4g0069 835 MobiDBLite consensus disorder prediction 726 753 - -
Mtr4g0069 835 MobiDBLite consensus disorder prediction 697 758 - -
Mtr4g0069 835 Pfam Sister chromatid cohesion protein PDS5 protein 31 233 - -
Mtr4g0069 835 Gene3D - 759 810 - -
Mtr4g0069 835 SUPERFAMILY ARM repeat 16 265 IPR016024 -
Mtr4g0069 835 MobiDBLite consensus disorder prediction 387 427 - -
Mtr4g0069 835 MobiDBLite consensus disorder prediction 312 673 - -
Mtr4g0069 835 MobiDBLite consensus disorder prediction 586 600 - -
Mtr4g0069 835 MobiDBLite consensus disorder prediction 460 486 - -
Mtr4g0069 835 MobiDBLite consensus disorder prediction 504 520 - -
Mtr4g0069 835 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 12 460 IPR039776 GO:0007064
Mtr4g0069 835 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 505 829 IPR039776 GO:0007064
Mtr4g0069 835 SUPERFAMILY Tudor/PWWP/MBT 760 807 - -
Mtr4g0069 835 MobiDBLite consensus disorder prediction 601 673 - -
Mtr4g0069 835 MobiDBLite consensus disorder prediction 342 369 - -
Mtr4g0069 835 MobiDBLite consensus disorder prediction 326 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0069 Mtr-Chr4 863336 869256 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0069 - - mtr:MTR_4g006875 1517.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0069 4 863336 869256 Mtr4g0069 4 863336 869256 ECH