Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0066 ATGCCGCTAATTTTACCTCAAAACGACGATTCGATTCAGATCCGTGAAGTTTGGAGCGATAACCTTGAAGAAGAATTCGCTGTGATTCGAGAAATTGTTGATGATTATCCTTTCATTGCTATGGATACGGAATTCCCTGGTATTGTTCTTCGACCTGTTGGGAATTTCAAGAGCAATTATGATTATCATTACCAAACCCTAAAAGATAATGTTGATATGTTAAAGCTTATTCAATTGGGTCTTACTTTTTCTGATGAGCATGGAAATCTTCCAACTTGCGGCGAAGATGATAGGTTTTGTATCTGGCAATTCAATTTTAGAGAATTTAATGTTAACGAGGATGTTTTTGCAAATGATTCAATTGAGCTTTTGAGACAAAGTGGAATTGATTTCAAGAAGAATAATGAAGATGGTATCGATGCTAGGCGTTTCGGTGAGCTTTTGATGTCATCTGGGATTGTTTTGAATGATAATGTTCATTGGATAACTTTTCATAGTGGATATGATTTTGGTTATTTGTTGAAGTTGTTGACTTGTCAAAATTTGCCGGATACACAAGTTGGGTTCTTTAATTTGATTAACATGTATTTCCCTATGCTGTATGATATCAAACATTTGATGAAGTTTTGTAATAGTCTTCATGGTGGGTTGAATAAGCTTGCAGAGTTGTTGGAGGTTAAGAGGGTTGGGATTTGTCATCAAGCGGGTTCGGATAGTTTACTCACATCTTCTGCATTCAGGAAATTGAAAGAGAATTTCTTTAGTGGATCTTTGGAGAAATATGCAGGGGTCTTGTATGGGTTAGGTGTTGAGAATGGACAGAGTACTCATTAA 834 0.3609 MPLILPQNDDSIQIREVWSDNLEEEFAVIREIVDDYPFIAMDTEFPGIVLRPVGNFKSNYDYHYQTLKDNVDMLKLIQLGLTFSDEHGNLPTCGEDDRFCIWQFNFREFNVNEDVFANDSIELLRQSGIDFKKNNEDGIDARRFGELLMSSGIVLNDNVHWITFHSGYDFGYLLKLLTCQNLPDTQVGFFNLINMYFPMLYDIKHLMKFCNSLHGGLNKLAELLEVKRVGICHQAGSDSLLTSSAFRKLKENFFSGSLEKYAGVLYGLGVENGQSTH* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0066 277 SUPERFAMILY Ribonuclease H-like 14 268 IPR012337 -
Mtr4g0066 277 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 7 277 IPR039637 GO:0004535|GO:0030014
Mtr4g0066 277 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 6-RELATED 7 277 - -
Mtr4g0066 277 Pfam CAF1 family ribonuclease 17 139 IPR006941 -
Mtr4g0066 277 Gene3D - 1 272 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0066 Mtr-Chr4 836966 838359 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0066 K12581 - twl:120007782 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0066 4 836966 838359 Mtr4g0066 4 836966 838359 ECH