Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0065 ATGGACTACAGCTCTGAAGAAGAGTCAGAGATCAGTGAGTCTGAGATCGAGGAATACTCTGAGAAACCATATGAAGAGTTAAGGGCCGGTAAATACAAAGTCAAGAACAACAATGGGACTCTTAGGTGCCCGTATTGCTCTGGAAAGAAAAAGCAAGAATTCAAGTATAAGGATCTGTTGCAACATGCATCTGGAGTAGGCAAAGGTTCGGCAAACAGAAGCACAAAGCAAAAAGCAAACCACCTGGCTCTGGCAAAGTTTTTGAGGACTGACTTAGCAAATGAAGCAGACCAAGTACCTCGCCCGGCTTTGACTGTAGCTGTTGTCCAACCTGTCCAAGTTGAGAACTACGTTTGGCCGTGGACAGGCATACTTGTCAACATAAGCAAATCACATGATTCTGGATACTTGCAAAAGGAATTTGCTAAGTACAAACCGTTGGCTGTTCATACGTTCTTGATGGATGGTAACTCCGTGGCTGTTATAGACTTCAACAATGACTGGAATGGGTTTATGAATGCAAGTGAGCTTGAGAAATGCTTTGAGACTAAACGTCGTGGAAAAAAGGATTGGAATTCCATGGACTTGCAGGACAGTTCAGAGATTTACGGTTGGGTTGCACGTGAAGATGATTATAATTGTCCAGGGTTGATTGGGGAGTACCTTCGCAACAAAGGAAGGCTGAGGACAATTTCAGATATAGTTCAAGAAGCATCTCAAAGCAGAAATAGCATTGTGGAAAACCTGGCAAATGAGATTGATATTACTAATGAAAATCTCAACAAGATGCAGTATAGGTATAATGAGAAGACTATGTCCTTGAGTAGGATGCTGGAGGAGAAAGACAAACTTCACAGTGCTTTTGTTGAAGAGTCAAGGAGCATGCAGCGTAAAGCTCGTGATGAGGTACGAAGGATATTGGAAGAACAAGAGAAGTTGAGTAATGAGTTGGATGAAAAAATGCGGAAGCTTGATACCTGGAGCAGAGACCTTAATAAGCGTGAGGTACTAACTGATCAAGAGAGGCAGAAACTAGAAGAGGACAAGAAGAAGAAAGACGTAAGGAATCAATCACTCCAGTTGGCCTCAAAGGAGCAGAAGATAGCTGATGAGAATGTCTTCAGGCTTGTTGAAGAGCAAAAGAGAGAAAAGGAGGAGGCCTTAAACAAGATCCTTCAGTTGGAAAAGCAACTAGATGCCAAACAAAAATTGGAAATGGAAATTGAAGAACTCAGAGGGAAACTGCAAGTTATGAAACATCTTGGAGATCAAGATGATACAGCTATCAAGAAAAAAATGGAAGAGATGAATTCGGAGTTGGAAGACAAAATAGAAAGCTTGGAGGATATGGAGTCTATGAATTCAACCCTCATTGTCAAGGAGCGCCAAAGCAATGATGAACTACAGGAAGCTCGTAAAGAATTAATAGAAGGGTTAAATGAAATGCTGACTGGTGCCAAAACTAATATTGGCACCAAGAGGATGGGAGACCTTGACCAGAAGGTTTTTGTGAATGCCTGCAAGAAAAGATTTTCTTCTGATGAAGCTGGGATAAAGGCCGTTGAGCTTTGCTCTTTATGGCAGGAAAATGTGAAGAACTCAGCTTGGCACCCTTTTAAAGTGGTCAGTCAGAATGATAACCCCGTGTCAGTTATAGATGAGGAAGATGAGAAACTACAAAAGCTGAAGAAGGAATGGGGAGACGAGATATATTCAGCTGTTGTAACAGCCTTAAAAGAAGTTAACGAGTACAACCCAAGTGGTGGGTATACTGTTTGGGAGCTGTGGAACTTCAAAGAAAATAGGAAGGCAACACTGAAAGAAGTGATCACTTATATTGTGGATCATATGAAGCAACTTAAGCGCAAAAGAGGAGGATAG 1881 0.4163 MDYSSEEESEISESEIEEYSEKPYEELRAGKYKVKNNNGTLRCPYCSGKKKQEFKYKDLLQHASGVGKGSANRSTKQKANHLALAKFLRTDLANEADQVPRPALTVAVVQPVQVENYVWPWTGILVNISKSHDSGYLQKEFAKYKPLAVHTFLMDGNSVAVIDFNNDWNGFMNASELEKCFETKRRGKKDWNSMDLQDSSEIYGWVAREDDYNCPGLIGEYLRNKGRLRTISDIVQEASQSRNSIVENLANEIDITNENLNKMQYRYNEKTMSLSRMLEEKDKLHSAFVEESRSMQRKARDEVRRILEEQEKLSNELDEKMRKLDTWSRDLNKREVLTDQERQKLEEDKKKKDVRNQSLQLASKEQKIADENVFRLVEEQKREKEEALNKILQLEKQLDAKQKLEMEIEELRGKLQVMKHLGDQDDTAIKKKMEEMNSELEDKIESLEDMESMNSTLIVKERQSNDELQEARKELIEGLNEMLTGAKTNIGTKRMGDLDQKVFVNACKKRFSSDEAGIKAVELCSLWQENVKNSAWHPFKVVSQNDNPVSVIDEEDEKLQKLKKEWGDEIYSAVVTALKEVNEYNPSGGYTVWELWNFKENRKATLKEVITYIVDHMKQLKRKRGG* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0065 626 Coils Coil 246 266 - -
Mtr4g0065 626 Pfam XS domain 115 213 IPR005380 GO:0031047
Mtr4g0065 626 MobiDBLite consensus disorder prediction 1 15 - -
Mtr4g0065 626 Gene3D XS domain 112 267 IPR038588 -
Mtr4g0065 626 Pfam XH domain 493 623 IPR005379 -
Mtr4g0065 626 Coils Coil 296 330 - -
Mtr4g0065 626 PANTHER RIBONUCLEASE P SUBUNIT P38 4 624 IPR045177 GO:0080188
Mtr4g0065 626 Coils Coil 377 421 - -
Mtr4g0065 626 PANTHER FACTOR OF DNA METHYLATION 1-RELATED 4 624 - -
Mtr4g0065 626 Coils Coil 430 453 - -
Mtr4g0065 626 Coils Coil 337 362 - -
Mtr4g0065 626 CDD RRM_like_XS 117 212 IPR005380 GO:0031047
Mtr4g0065 626 MobiDBLite consensus disorder prediction 1 22 - -
Mtr4g0065 626 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0065 Mtr-Chr4 818303 823856 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0065 - - mtr:MTR_4g131350 1042.34