Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0063 ATGTTGTTTTCTACATATTGTTTGGTCTTAGCACAAATCTACGGCATAATACCCACATGCATTATTACTAAGGGATTCCATGTGGGTCAAGCAAGAAAACTTGAAGCTCAATTGGATGAGCAGATGAATGCTTACCGTAAATTAGTTTCTACCAATCTTTCAACAAAAGGTGATGCTGCACAGAGTGATGTAGAGTCATGGATTGAGCGGTTAATAAAACAACTCCAACAAGTAAACTCACAGATGCAAGCTTGGGTATCATCTGGTGGCTCAGATATGGTGTCTCATACTTTGACTAGACACCAAGAAATTCTTCAAGATATCACTCAGGAGTTTTATCGTCTTCGCTCAAGTCTTCGAGCAAAGCAAGAACACGCTTCACTTTTAGATGATTTTAAAGAATTTGACCGGACAAGATTAGACTTGGAAGAGGGTGGAGAATCTGAACAGCATACACTCCTGAAAGAGAATGCATCAATCAGCCGAAATACTGGACATATGGACGGTGTAATATCACAAGCACAAGCAACACTGGGGGCACTTGTCTTCCAGCGTTCAACATTTGGTGGCATCAATTCAAAGCTCAGCAACGTGAGCAGTCGTCTCCCTACGGTAAATAACATACTCTCAGCAATAAAGCGAAAAAAGTCAATGGATACCCTAATACTTTCTCTTGTGGCATCTGTATGCACATTTCTCATTTTGATCTACTGGATAACCAAATGA 726 0.4036 MLFSTYCLVLAQIYGIIPTCIITKGFHVGQARKLEAQLDEQMNAYRKLVSTNLSTKGDAAQSDVESWIERLIKQLQQVNSQMQAWVSSGGSDMVSHTLTRHQEILQDITQEFYRLRSSLRAKQEHASLLDDFKEFDRTRLDLEEGGESEQHTLLKENASISRNTGHMDGVISQAQATLGALVFQRSTFGGINSKLSNVSSRLPTVNNILSAIKRKKSMDTLILSLVASVCTFLILIYWITK* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0063 241 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1 30 241 - -
Mtr4g0063 241 PIRSF Golgi_SNARE 28 240 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Mtr4g0063 241 Pfam Snare region anchored in the vesicle membrane C-terminus 153 216 - -
Mtr4g0063 241 Coils Coil 31 51 - -
Mtr4g0063 241 PANTHER GOS-28 SNARE- RELATED 30 241 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0063 Mtr-Chr4 770335 779606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0063 K08495 - gmx:100797885 363.999