Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0050 ATGGTTGAAACACGAATTTTACCGGATGATTGCTGGGAATCGGTCATCACATTCCTAACCGGCGGAGACAGCAATCATCCTTACTTGAAGTCTCTCTCTGTTGTCTCAAAACAGTTTCTCTCCATCACCAATAATCTTCCACTCTCACTCACAGTCTATAATCAAACACGCCCTTTTCTTCCTCGCCTCTTCATTAGATTTACTAACCTCACCTCCCTTAACCTCACTTGCTTTGGTGGTGATCTCGATGGGCTTCTATGTGTAATCTCTTGTTTTCGATTGAACCACCTTACATCGCTCAATCTCTCTAACCAACCCTTCATTCCCACAAATGGCTTGCAAGTCTTCGCACGAAAGTTTACAACTTTGAACTCTCTCACTTGTTCCAACATTGATTCTCTCTGTAACAACGACCTGGTTTGTATATCTGGTTGCTTCCCTTTCCTTGAAGAACTTGACCTCAGTAACCCTAAAGAGATTATTGATATTACTGATGTTGGGGTAAAGGCTATGTCAACAGCGCTTCCTAAGCTCCGCAAGGTTAATTTATCTGGTCATTACTATATAAATGACTCATTGCTTTTTCACTTGTGTCAAAGTTGTGAGTTTCTCGAAGAGTTTGTGATGTTAGACCATTCATCACGTTGGAGTCCATCCCTAACTAATGATGGCATAGCTTCTGCTATCCGTGTGAGACCATCTTTGAGGTCTCTCTCCATTAAATGGCCGTCAAAGGGAAGGCATGACATTAGTTCGCACCTTATTGACTCGTTGATGTGTTTGAAGGGCTTAACTTGTCTTGATTTTCGGTCTTCACGTATCTCGGATATGTTGCTCTCCTCTATTGCAATGGAAGCTATTCCTTTGAGAAAGCTTGTCCTCCAAAATTGTTTCGGCTATAGTTATGCTGGAATATCTTGTTTTTTGTCCAAGTGCCAACATATCCAACATTTAGATCTTCAAAATGCTGTTTTTTTGACTAATCAACATGTTCTTGACTTGTCTTTGTTTCTTGGTGATTTGGAGTTTATAAACCTTAGTCAGTGTGGGCAACTCACAAATTTAGCCTTGTTTGCACTCGTTAGTAATTGTGCTTCACTTAGTGAGATCAAAATGGAACTCACAAAAATTGGGATGGAGAGTGTAGAGAATTCTAATTCTTTCAAGGATTTTGTTGTAAGCCCTCAATTGAAGTCTCTCCATTTGGCTAAAAATTCATGCATAAGAGATGAAAGCATCAAAATGTTTCCTTCCATGTTCCCCAATTTGCAACTGCTTGATTTAAGTTATTGTCGTAACATATCTGAAGACAGTATTTGTGATGTTTTAAGGAGATGTTGTAAGATAAGGCATTTGAACTTATCCAATTGTTTAGTAGTGAACCTATTTGGAATGAACTTTGAAGTTCCTAAATTGGAGGTGGTGAACTTGTCACGTACAATTGTCAATGATGAAACACTCTATGTGATCTCAAAGAGTTGTTGTGGGCTTTTGGAATTGTTACTGGAAGAATGTTTTCATGTCACAGAGAAGGGAGTGAAACATGTGCTAGAAAACTGCACAAAACTAAGAGAGATCAATTTAAGGGCTTGTAATAAAGTGAATGTTAATGCCGTTGCTTCAATGTTATTTTTAAGGCCATCATTGAGAAAGATAATAGCTCCATCTGGTTTGGATTTGAGCAAAACAGAGAGAATCTTCCTGCATCGAGGAGATTATGCTTGCTAG 1728 0.3895 MVETRILPDDCWESVITFLTGGDSNHPYLKSLSVVSKQFLSITNNLPLSLTVYNQTRPFLPRLFIRFTNLTSLNLTCFGGDLDGLLCVISCFRLNHLTSLNLSNQPFIPTNGLQVFARKFTTLNSLTCSNIDSLCNNDLVCISGCFPFLEELDLSNPKEIIDITDVGVKAMSTALPKLRKVNLSGHYYINDSLLFHLCQSCEFLEEFVMLDHSSRWSPSLTNDGIASAIRVRPSLRSLSIKWPSKGRHDISSHLIDSLMCLKGLTCLDFRSSRISDMLLSSIAMEAIPLRKLVLQNCFGYSYAGISCFLSKCQHIQHLDLQNAVFLTNQHVLDLSLFLGDLEFINLSQCGQLTNLALFALVSNCASLSEIKMELTKIGMESVENSNSFKDFVVSPQLKSLHLAKNSCIRDESIKMFPSMFPNLQLLDLSYCRNISEDSICDVLRRCCKIRHLNLSNCLVVNLFGMNFEVPKLEVVNLSRTIVNDETLYVISKSCCGLLELLLEECFHVTEKGVKHVLENCTKLREINLRACNKVNVNAVASMLFLRPSLRKIIAPSGLDLSKTERIFLHRGDYAC* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0050 575 PANTHER NODULIN-LIKE PROTEIN 395 546 - -
Mtr4g0050 575 PANTHER NODULIN-LIKE PROTEIN 6 324 - -
Mtr4g0050 575 PANTHER NODULIN-LIKE PROTEIN 248 400 - -
Mtr4g0050 575 Gene3D Ribonuclease Inhibitor 465 565 IPR032675 -
Mtr4g0050 575 PANTHER UNCHARACTERIZED 248 400 - -
Mtr4g0050 575 PANTHER UNCHARACTERIZED 395 546 - -
Mtr4g0050 575 PANTHER UNCHARACTERIZED 6 324 - -
Mtr4g0050 575 SMART LRR_CC_2 94 119 IPR006553 -
Mtr4g0050 575 SMART LRR_CC_2 338 363 IPR006553 -
Mtr4g0050 575 SMART LRR_CC_2 312 337 IPR006553 -
Mtr4g0050 575 SMART LRR_CC_2 520 545 IPR006553 -
Mtr4g0050 575 SMART LRR_CC_2 394 419 IPR006553 -
Mtr4g0050 575 SMART LRR_CC_2 146 174 IPR006553 -
Mtr4g0050 575 SMART LRR_CC_2 494 519 IPR006553 -
Mtr4g0050 575 SMART LRR_CC_2 420 445 IPR006553 -
Mtr4g0050 575 SMART LRR_CC_2 175 200 IPR006553 -
Mtr4g0050 575 SUPERFAMILY RNI-like 58 297 - -
Mtr4g0050 575 SUPERFAMILY RNI-like 225 547 - -
Mtr4g0050 575 Gene3D Ribonuclease Inhibitor 373 464 IPR032675 -
Mtr4g0050 575 Gene3D Ribonuclease Inhibitor 10 333 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0050 Mtr-Chr4 572285 574012 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0050 K10268 - gmx:100819538 506.523