Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0036 ATGGAAGCTTCATCCATAACCGTTTCCTTACAGTTTCTATTACTCTTATTTTTCACCACAATTTTCTTTCCCTCTTCCTTCGCTTCTCAACAACAAGACAAGCCACCGAGTTACCTAAAAATGGTTGCAAACGCAAGCGAGTTTCCGTTAGAAGATTACTACGACTACATAATCGTCGGTGGCGGAACCGCCGGTTGTCCATTAGCCGCCACACTCTCCCAATCCCACCGCGTTCTCATCCTCGAACGCGGCGGAGTCATCCATGGAAAACTCAACCTAATGAACCAAGAAGGTTTCTTGAACACACTCTTGAGCGCTACCGCAAACAACGCCAACAACGAAGATTCACCGGCGCAATCTTTCGTTTCTGAAGACGGTGTTCTCAATGCTCGTGGCCGTGTTCTTGGTGGTAGTAGTGCGATTAACGCAGGGTTTTATAGTCGTGCTGATTGTGAATTCTTTACGAAATCTGGTCTTAATTGGGATTTGAAACTTGTGAATGAATCGTATGAATGGGTTGAACGTGAAATCGTGTTTCGTCCTGATTTGAAAACGTGGCAATCCGCTGTTCGTGATGGTCTTCTTGAAGCTGGTGTTGGTCCTTATAACGGTTTCACCTTAGATCATGCTACTGGTACCAAAATCGGTGGATCCACCTTCGATTCCCAAGGTAAACGACATAGTTCTGCGGATCTTTTACGATATGCGCGACATTCCAATCTCAGAATCGCCGTTTATGCTAGCGTGGAAAGACTCCTTCTAGCATCTTCTTCATCTTCTTTTGCACCAAATTCTGCAACAGGTTCTTCTGTTATTGGTGTTCTTTATCGTGATCAAAACGGTAGATATCATCATGCGATGTTGAAAGATTTTGGTGAAGTGATACTTTCAGCAGGTGCAATTGGAAGTCCACAGCTTCTTCTTCTCAGTGGAATTGGACCTAGACCTTATCTTTCTTCATGGGGAATTCCAGTGGCACATCATTTACCTTATGTAGGTCATTTTCTATATGATAATCCACGTAATGGAATCACGATTCTACCTTCTGTTCCGCTTGAACATTCGCTTATACAAGTTGTAGGGATAACAAATTCAGGTGCTTATATAGAAGCTGCTTCTAATGTTGTTCCGTTTTTGTCACCACCGCAAACTGCTTTCATCCGTTCGAGTGCTTCTCCGCTTTATCTGACAGTTGGAACACTGATTTCAAAGATTTCAGGACCGGTTTCTGCTGGTTTTCTACGATTGGCTTCGACTGATGTTAGGTTTAATCCTATTGTTAGGTTTAATTACTTTAGCAATGGTGTTGATGTTGAGAAATGTGTTAATGGGACCAGAAAATTAGGGGATGTACTTCGGAGCAGAGCTATGAATGATTTTAAGTTTAGGAATTGGTTAGGTGTGAGGGATTTTAGGTTTATTGGACCTGCTTTGCCTAATGATCAAACGGATTATGCTGAAATGGCTGATTTTTGTAAAAGGACTGTTAGTACTATATGGCATTATCATGGTGGATGTGTTGTTGGTAGGGTTGTTAATCGTCATCTTAAGGTCATTGGAATTGATTCTCTTAGAATTGTGGATGGTTCTGTTTTTAGTGTTTCACCTGGAACTAATCCTCAGGCTACACTAATGATGCTTGGAAGGTATTTTGGGCTGAAGATAATCAGAGAAAGGGAAGGGAAGGGTACACATGAGTTGTGA 1704 0.4208 MEASSITVSLQFLLLLFFTTIFFPSSFASQQQDKPPSYLKMVANASEFPLEDYYDYIIVGGGTAGCPLAATLSQSHRVLILERGGVIHGKLNLMNQEGFLNTLLSATANNANNEDSPAQSFVSEDGVLNARGRVLGGSSAINAGFYSRADCEFFTKSGLNWDLKLVNESYEWVEREIVFRPDLKTWQSAVRDGLLEAGVGPYNGFTLDHATGTKIGGSTFDSQGKRHSSADLLRYARHSNLRIAVYASVERLLLASSSSSFAPNSATGSSVIGVLYRDQNGRYHHAMLKDFGEVILSAGAIGSPQLLLLSGIGPRPYLSSWGIPVAHHLPYVGHFLYDNPRNGITILPSVPLEHSLIQVVGITNSGAYIEAASNVVPFLSPPQTAFIRSSASPLYLTVGTLISKISGPVSAGFLRLASTDVRFNPIVRFNYFSNGVDVEKCVNGTRKLGDVLRSRAMNDFKFRNWLGVRDFRFIGPALPNDQTDYAEMADFCKRTVSTIWHYHGGCVVGRVVNRHLKVIGIDSLRIVDGSVFSVSPGTNPQATLMMLGRYFGLKIIREREGKGTHEL* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0036 567 SUPERFAMILY FAD/NAD(P)-binding domain 46 365 IPR036188 -
Mtr4g0036 567 Pfam GMC oxidoreductase 54 339 IPR000172 GO:0016614|GO:0050660
Mtr4g0036 567 Gene3D - 54 548 IPR036188 -
Mtr4g0036 567 Gene3D - 179 498 - -
Mtr4g0036 567 PANTHER OSJNBA0019K04.7 PROTEIN 35 562 - -
Mtr4g0036 567 Pfam GMC oxidoreductase 408 549 IPR007867 GO:0016614
Mtr4g0036 567 ProSitePatterns GMC oxidoreductases signature 2. 299 313 IPR000172 GO:0016614|GO:0050660
Mtr4g0036 567 PIRSF Alcohol_oxidase 27 376 IPR012132 GO:0050660
Mtr4g0036 567 PIRSF Alcohol_oxidase 370 566 IPR012132 GO:0050660
Mtr4g0036 567 PANTHER (R)-MANDELONITRILE LYASE-LIKE 35 562 - -
Mtr4g0036 567 SUPERFAMILY FAD-linked reductases, C-terminal domain 336 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0036 Mtr-Chr4 427669 431146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0036 8 560 Miscellaneous Gene Families AT5G51950 43.603 9.08e-147 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0036 K08248 - gmx:100820069 812.757