Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0028 ATGGTGGAATCGAAGAAGAAGACCGAAACGGTACATTCACCACTCGTCACATATGCTTCTATGATATCTCTTCTCACACTTGCTCCTCCTTTCGTCAATCTACTATGGTATACAATGACGGCTATGGATGGATCAATTTTGAAGACATTTGATTATTTGAACAATAATGGTTTACAAGGTTTTGTTAATCTATGGCCTAAACCAACACTTCTCTCTTTCCAAATTATAGCTGTTTATGCTGTATTTGAAGCTACACTTCAGCTTCTTCTTCCTGGGGAAACTGTTTACGGTCCTATTTCTCCCACCGGTAATCGCCCTGTCTATAAGGCAAATGGTGTTGCTGCATATTTAGTTACTTTGGTTACTTACATTGCACTTTGGCGGTTTGGGATATTCAACCCAACAATCGTTTATGATCATTTGGGGGAGATATATTCCACACTCAGCTTTGGGAGCTTTATCTTTTGTATTTTCTTATACATAAAAGGTCATTTGGCACCATCTTCTACTGATTCTGGTTCAAGTGGGAACATAATCATCGATTTTTACTGGGGTATGGAGCTCTATCCACGCATTGGAAAATATTTTGACATAAAAGTTTTCACAAACTGCAGATTTGGAATGATGTCGTGGGCTGTTCTGGCACTTACTTACTGCATAAAGCAGTATGAAGAAAATGGGAAGGTAGCTGACTCAATGCTTGTAAATACTACATTAATGCTGGTGTATGTTACCAAGTTTTTCTGGTGGGAAGCTGGATACTGGAACACAATGGATATTGCACACGATCGAGCTGGATTTTATATTTGCTGGGGCTGTTTGGTTTGGGTTCCATCAGTGTATACATCTCCTGGAATGTACCTTGTCAACCATCCAGTGAATCTTGGCACCCAGCTAGCACTCTTTATTTTAGTGGCTGGCATTATGTGCATATACATCAATTATGATTGTGACAGGCAAAGACAAGAGTTTCGTAGGACAAATGGAAAAAGCTTGGTCTGGGGAAAAGCTCCATCTAAGATAGAAGCCTCATATACCACTGCTTCCGGGGAAACAAAAAGAAGCCTTCTTTTAACCTCTGGATGGTGGGGATTAGCTCGTCATTTTCATTATGTACCTGAAATACTAGCTGCATTCTTCTGGACAGTCCCAGCTCTTTTCAATCACTTCTTGCCTTACTTCTACGTGATATTTCTTATTATCCTTCTTTTTGATCGAGCAAAAAGGGATGATGATCGATGCAGATCCAAGTATGGAAAGTACTGGAAACTCTATTGCGACAGGGTACCTTACAGAATCATTCCAGGAATATATTGA 1317 0.3986 MVESKKKTETVHSPLVTYASMISLLTLAPPFVNLLWYTMTAMDGSILKTFDYLNNNGLQGFVNLWPKPTLLSFQIIAVYAVFEATLQLLLPGETVYGPISPTGNRPVYKANGVAAYLVTLVTYIALWRFGIFNPTIVYDHLGEIYSTLSFGSFIFCIFLYIKGHLAPSSTDSGSSGNIIIDFYWGMELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVADSMLVNTTLMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGTQLALFILVAGIMCIYINYDCDRQRQEFRRTNGKSLVWGKAPSKIEASYTTASGETKRSLLLTSGWWGLARHFHYVPEILAAFFWTVPALFNHFLPYFYVIFLIILLFDRAKRDDDRCRSKYGKYWKLYCDRVPYRIIPGIY* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0028 438 Pfam Ergosterol biosynthesis ERG4/ERG24 family 58 438 IPR001171 GO:0016020|GO:0016126|GO:0016628
Mtr4g0028 438 Gene3D - 228 437 - -
Mtr4g0028 438 PANTHER DELTA(14)-STEROL REDUCTASE 8 438 - -
Mtr4g0028 438 PANTHER 7-DEHYDROCHOLESTEROL REDUCTASE 8 438 - -
Mtr4g0028 438 ProSitePatterns Sterol reductase family signature 2. 402 425 IPR018083 GO:0016628
Mtr4g0028 438 ProSitePatterns Sterol reductase family signature 1. 176 191 IPR018083 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0028 Mtr-Chr4 281953 306545 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0028 8 438 Miscellaneous Gene Families AT1G50430 82.599 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0028 K00213 - gmx:102659420 810.061