Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0020 ATGTCGTCAAACACAAAAACCAATACCCTTTCTTCATCTTCTTCGTCTTCTTCACTCTCTCACGAGCAAAAGAGCAATGGTGTGTTTGGTGATGTTTACGCCATCCTGAAAGACGTTGATATTCTTCCCAACGCTTTTCGATTTCAACTTCCTCACCAAGCACAGGATTTTTTAGATAAGAGAGAAGTTCGTGAGTTTATGAGCGGCGCCCTAGCTGGTGCTATGACTAAAGCCATTCTTGCTCCTCTTGAAACCATCAGGACAAGAATGGTAGTTGGTGTTGGGTCGAGAAATATCGCAGGTAGTTTCGTTCAGGTTGTAGAACAGCAGGGATGGCAAGGATTGTGGGCTGGAAACATGATCAATATGATTCGTATAGTTCCCACACAAGCCATTGAGTTTGGTACATTTGAGTGGACAAAACGGGGGATGGCATCACTGCAAGAGAAATGGGAACAGAATGAATCTCCTAAGTTGCAGATAGGTTGCATCAATCTGAGCTTGTCTTTATCTTGGATTTCACCAACTGCCGTGGCTGGGGCAGCTGCAGGAATTGCTAGCACACTTGCATGCCATCCCCTAGAAGTTTTGAAGGATCGGTTAACTATAAGTCCTGAAATATACCCTAATTTGGGTGCTGCAATTAGAAATATTTATAAAGATGGTGGTATCGGCGCTTTTTATGCTGGTTTATCACCTACTCTTGTTGGCATGCTTCCATACAGTACCTGTTATTATTTCATGTATGACACAATAAAGAAATCTTACTGCCTGACCAAAAATAAGAAGTCTTTAAATCGTCCGGAGATGCTTATAATTGGAGCTCTATCAGGTTTTACTGCCAGTACAATTAGCTTTCCATTGGAGGTAGCTAGAAAGCGTCTGATGGTCGGAGCATTACAAGGTAAGTGCCCACCAAACATGGCAGCAGCATTGTCGGAAGTTATTCGAGAAGAAGGTCTGAAGGGTCTATACAGAGGTTGGGGTGCAAGCTGTTTAAAGGTAATGCCATCCTCTGGAATCACCTGGATGTTTTATGAAGCATGGAAAGACATACTGGTTGTCCAGAAGGGTATTTCCTTATAG 1086 0.4291 MSSNTKTNTLSSSSSSSSLSHEQKSNGVFGDVYAILKDVDILPNAFRFQLPHQAQDFLDKREVREFMSGALAGAMTKAILAPLETIRTRMVVGVGSRNIAGSFVQVVEQQGWQGLWAGNMINMIRIVPTQAIEFGTFEWTKRGMASLQEKWEQNESPKLQIGCINLSLSLSWISPTAVAGAAAGIASTLACHPLEVLKDRLTISPEIYPNLGAAIRNIYKDGGIGAFYAGLSPTLVGMLPYSTCYYFMYDTIKKSYCLTKNKKSLNRPEMLIIGALSGFTASTISFPLEVARKRLMVGALQGKCPPNMAAALSEVIREEGLKGLYRGWGASCLKVMPSSGITWMFYEAWKDILVVQKGISL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0020 361 SUPERFAMILY Mitochondrial carrier 63 347 IPR023395 -
Mtr4g0020 361 PANTHER SOLUTE CARRIER FAMILY 25 46 358 - -
Mtr4g0020 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 171 255 IPR018108 -
Mtr4g0020 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 352 IPR018108 -
Mtr4g0020 361 Pfam Mitochondrial carrier protein 269 354 IPR018108 -
Mtr4g0020 361 Pfam Mitochondrial carrier protein 175 256 IPR018108 -
Mtr4g0020 361 Pfam Mitochondrial carrier protein 63 144 IPR018108 -
Mtr4g0020 361 PANTHER MITOCHONDRIAL ADENINE NUCLEOTIDE TRANSPORTER BTL1-RELATED 46 358 - -
Mtr4g0020 361 PRINTS Mitochondrial carrier protein signature 65 78 IPR002067 GO:0055085
Mtr4g0020 361 PRINTS Mitochondrial carrier protein signature 78 92 IPR002067 GO:0055085
Mtr4g0020 361 PRINTS Mitochondrial carrier protein signature 118 138 IPR002067 GO:0055085
Mtr4g0020 361 PRINTS Mitochondrial carrier protein signature 228 246 IPR002067 GO:0055085
Mtr4g0020 361 PRINTS Mitochondrial carrier protein signature 274 296 IPR002067 GO:0055085
Mtr4g0020 361 Gene3D Mitochondrial carrier domain 45 357 IPR023395 -
Mtr4g0020 361 MobiDBLite consensus disorder prediction 1 22 - -
Mtr4g0020 361 ProSiteProfiles Solute carrier (Solcar) repeat profile. 60 143 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0020 Mtr-Chr4 229327 233088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0020 43 354 Organic Solute Cotransporters AT3G20240 73.397 2.95e-175 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0020 - - gmx:100777341 559.681