Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0017 ATGTCTATGAGAAGCATCAACTGCAATTGCAATTGCAATTGGAACGGTGGTTTATTCCCTTTTCGAATAAAAAATAGTGGTGGCTTCGGAGGAGGAGGAGAGCAAGCTGCACCGCGTTTAACTTCACAAGTCAATTCCCAAGACATTGACTTTCAACAACGCCTCAACGCTATTAAAAGGTCAGCACTTGAACAAAAGAAAGCACAAGATAAAAAACAATTTGGAGCAATTGACTATGATTCACCTATTTCTATTTCTGAGTCAGACAATAAAACAATTTCCTTTGCTACCAAGGTTGGAATAGGTGTAGCTGTTCCAGTCTTTGCTCTCGTTTTTGCTCTTGGAGATTTTCTCCCATCAGGAAGTCCCAACGAAGACAACATTGCTTTGGTCAATGATAAATTGTCAGACATGGATAAAACTGCTCTTCAGAGTAGGCTTAAGGAATTTGAAGCAACATTAAGCAACTCCCCAAGAGATCCAACTGCTCTCGAAGGAGCTGCAGTAACTTTGGCAGAACTAGGAGAGTATGCAAGAGCTGCTTCTCTACTTGATGATTTGACAAAGGAAAAACCAAATGATGCTGATGCTTTTCGTTTGCTTGGAGAAGTAAAGTATGAACTCAAAGATTATGAAGGGAGTATTGCTGCATATAAAAGTTCAGCAAAGGTATCTGAAGATATCAAATTTGAAGTTCTACGTGGCCTTACCAATTCATTACTTGCTGCCAAGAAGCCAGACGAGGCTGTTCAATTACTTTTGGCCTGTCGTGAGCGTCTGAGTTCAGAAGATTTAAGCAAAAAAACTGATAGCAGCCCAACAGACTCGCAGAAGCTGGATCCAATTCAAGTTGAATTACTTCTAGGGAAAGCCTATTCAGATTGGGGCCATGTCGGTGATGCCATAGCTATTTATGATCAGCTCATATCAACTCACCCTGATGATTTTCGTGGATATTTGGCCAAGGGAATCATCCTCAAAGAAAACAAAAACATTGGAGATGCTGAGAGGATGTTCATTCAAGCTAGGTTCTTTGCACCAGATAAAGCTAAAGCACTCGTGGACCGTTATTCAAGATAA 1080 0.4065 MSMRSINCNCNCNWNGGLFPFRIKNSGGFGGGGEQAAPRLTSQVNSQDIDFQQRLNAIKRSALEQKKAQDKKQFGAIDYDSPISISESDNKTISFATKVGIGVAVPVFALVFALGDFLPSGSPNEDNIALVNDKLSDMDKTALQSRLKEFEATLSNSPRDPTALEGAAVTLAELGEYARAASLLDDLTKEKPNDADAFRLLGEVKYELKDYEGSIAAYKSSAKVSEDIKFEVLRGLTNSLLAAKKPDEAVQLLLACRERLSSEDLSKKTDSSPTDSQKLDPIQVELLLGKAYSDWGHVGDAIAIYDQLISTHPDDFRGYLAKGIILKENKNIGDAERMFIQARFFAPDKAKALVDRYSR* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0017 359 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 41 359 - -
Mtr4g0017 359 SUPERFAMILY TPR-like 160 353 IPR011990 GO:0005515
Mtr4g0017 359 Pfam Tetratricopeptide repeat 169 222 - -
Mtr4g0017 359 ProSiteProfiles TPR repeat profile. 282 315 IPR019734 GO:0005515
Mtr4g0017 359 Gene3D Tetratricopeptide repeat domain 125 357 IPR011990 GO:0005515
Mtr4g0017 359 SMART tpr_5 316 349 IPR019734 GO:0005515
Mtr4g0017 359 SMART tpr_5 230 263 IPR019734 GO:0005515
Mtr4g0017 359 SMART tpr_5 161 194 IPR019734 GO:0005515
Mtr4g0017 359 SMART tpr_5 282 315 IPR019734 GO:0005515
Mtr4g0017 359 SMART tpr_5 195 228 IPR019734 GO:0005515
Mtr4g0017 359 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 41 359 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0017 - - gmx:100777868 497.664