Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0010 ATGTGGAAGCTGAAGATTGGAGAGGGAAAGAATGAGCCATACTTATTCAGCACAAATAATTTTGTGGGAAGACAAACATGGGAGTATGATCCAGAAGCAGGTAGTGAAGAAGAAAGAGCACAAGTTGAAGAAGCTCGTAAGAATTTCTATGACAACAGATTCAAGGTCAAGCCCTGTGGTGACCTCCTATGGCGTTTTCAGGTTCTAAGAGAAAATAACTTTATGCAAACAATAGATGGAGTGAAGATAGAAGATGGAGAAGAGATAACATATGAGAAAGCAACGACAACGTTGAGAAGGGGCACACACCATCTAGCAGCATTGCAAACCAGTGATGGCCATTGGCCTGCTCAAATTGCAGGTCCTCTATTTTTCATGCCTCCCTTGGTTTTCTGTGTCTACATTACTGGACATCTTGATTCCGTCTTCCCACGAGAACATCGCAAAGAGATTCTTCGTTACATTTACTGTCACCAAAATGAAGATGGAGGATGGGGGCTACACATTGAGGGTCACAGCACCATGTTTTGTACTGCACTTAACTATATATGTATGCGAATTCTCGGAGAAGGACCTGATGGCGGTCAAGACAATGCTTGTGCTAGAGCCAGAAACTGGATTCGGGCACACGGTGGTGTCACATATATACCTTCATGGGGAAAAACTTGGCTTTCGATACTTGGTCTCTTTGATTGGTTGGGAAGCAACCCAATGCCCCCTGAGTTTTGGATCCTTCCTTCATTTCTTCCTATGCATCCAGCTAAAATGTGGTGTTATTGTCGATTGGTATACATGCCTATGTCTTACTTGTACGGGAAGAGATTTGTGGGTCCGATCACACCACTCATCTTACAGTTGAGAGAAGAACTCCATACTCAGCCTTATGAAAAAATTAACTGGACGAAATCACGTCACCTATGTGCAAAGGAAGATATTTACTATCCCCATCCTTTGATACAAGATCTGATATGGGATAGCTTATACATATTTACCGAGCCGCTTCTCACTCGCTGGCCTTTCAACAAGCTGGTCAGAAAAAGAGCCCTTGAAGTTACAATGAAGCATATCCACTACGAGGATGAGAACAGTCGATACCTAACCATTGGGTGTGTGGAAAAGGTATTATGTATGCTTGCTTGTTGGGTGGAAGATCCAAATGGAGATGCTTACAAGAAGCATCTTGCAAGGGTCCAAGATTACTTGTGGATGTCAGAAGATGGAATGACCATGCAGAGTTTTGGTAGCCAAGAATGGGATGCTGGTTTTGCCGTTCAAGCTTTGCTTGCCGCTAACCTAAATGATGAAATCGAACCTGCACTTGCCAAAGGACATGATTTCATTAAGAAATCTCAGGTTACAGAGAACCCTTCTGGAGATTTTAAGAGTATGCATCGTCATATTTCTAAAGGCTCATGGACCTTCTCCGATCAAGACCATGGATGGCAAGTTTCTGATTGCACCGCTGAAGGTTTGAAGTGTTGTCTACTTTTATCAATGTTGCCTCCAGAGATTGTGGGGGAAAAGATGGAACCAGAAAGGTTATATGATTCGGTCAATGTCTTGTTGTCGCTTCAGAGTAAAAAGGGTGGTTTGGCAGCATGGGAGCCCGCAGGAGCTCAAGAGTGGTTAGAACTACTCAATCCCACTGAGTTTTTTGCGGACATTGTTGTTGAGCATGAATATGTTGAGTGCACTGGATCAGCAATTCAAGCTTTAGTTTTGTTCAAGAAGCTATATCCAGGGCATAGGAAGAAAGAGATAGAGAATTTCATCTCCGAGGCAGTTCGATTCATTGAAGATATACAAACAGCCGATGGTTCATGGTATGGAAACTGGGGAGTTTGCTTCACTTATGGTTCTTGGTTTGCTCTTGGTGGTTTAGCAGCTGCTGGCAAGACTTATACCAATTGCGCTGCTATTCGCAAAGCTGTTAAATTTCTTCTCACAACACAGAGAGAGGATGGTGGGTGGGGGGAGAGCTATCTTTCAAGCCCAAAAAAGATATATGTACCTCTCGAAGGAAGCCGATCCAATGTTGTACATACTGCATGGGCTCTTATGGGTTTAATTCATGCCGGCCAGGCAGAGAGAGACCCTACTCCTCTCCATCGTGCTGCAAAATTGCTCATCAATTCCCAGTTGGAAGAAGGCGATTGGCCCCAACAGGAAATCACAGGAGTATTCATGAAAAATTGTATGTTGCATTACCCAATGTATAGAGATATTTACCCCTTGTGGGCTCTAGCCGAGTATCGTAGACGGGTTCCATTGCCTTCCACTGCAGTTTAA 2289 0.4364 MWKLKIGEGKNEPYLFSTNNFVGRQTWEYDPEAGSEEERAQVEEARKNFYDNRFKVKPCGDLLWRFQVLRENNFMQTIDGVKIEDGEEITYEKATTTLRRGTHHLAALQTSDGHWPAQIAGPLFFMPPLVFCVYITGHLDSVFPREHRKEILRYIYCHQNEDGGWGLHIEGHSTMFCTALNYICMRILGEGPDGGQDNACARARNWIRAHGGVTYIPSWGKTWLSILGLFDWLGSNPMPPEFWILPSFLPMHPAKMWCYCRLVYMPMSYLYGKRFVGPITPLILQLREELHTQPYEKINWTKSRHLCAKEDIYYPHPLIQDLIWDSLYIFTEPLLTRWPFNKLVRKRALEVTMKHIHYEDENSRYLTIGCVEKVLCMLACWVEDPNGDAYKKHLARVQDYLWMSEDGMTMQSFGSQEWDAGFAVQALLAANLNDEIEPALAKGHDFIKKSQVTENPSGDFKSMHRHISKGSWTFSDQDHGWQVSDCTAEGLKCCLLLSMLPPEIVGEKMEPERLYDSVNVLLSLQSKKGGLAAWEPAGAQEWLELLNPTEFFADIVVEHEYVECTGSAIQALVLFKKLYPGHRKKEIENFISEAVRFIEDIQTADGSWYGNWGVCFTYGSWFALGGLAAAGKTYTNCAAIRKAVKFLLTTQREDGGWGESYLSSPKKIYVPLEGSRSNVVHTAWALMGLIHAGQAERDPTPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYPMYRDIYPLWALAEYRRRVPLPSTAV* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0010 762 Gene3D - 389 761 - -
Mtr4g0010 762 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 121 410 IPR008930 -
Mtr4g0010 762 ProSitePatterns Terpene synthases signature. 605 619 IPR002365 GO:0016866
Mtr4g0010 762 Pfam Squalene-hopene cyclase C-terminal domain 418 753 IPR032696 -
Mtr4g0010 762 PANTHER TERPENE CYCLASE/MUTASE FAMILY MEMBER 1 756 IPR018333 GO:0005811|GO:0016104|GO:0016866
Mtr4g0010 762 PANTHER LUPEOL SYNTHASE 1 1 756 - -
Mtr4g0010 762 SFLD Prenyltransferase Like 2 25 754 IPR018333 GO:0005811|GO:0016104|GO:0016866
Mtr4g0010 762 Pfam Squalene-hopene cyclase N-terminal domain 99 405 IPR032697 -
Mtr4g0010 762 TIGRFAM squalene_cyclas: squalene/oxidosqualene cyclases 97 753 IPR018333 GO:0005811|GO:0016104|GO:0016866
Mtr4g0010 762 CDD SQCY_1 98 751 IPR018333 GO:0005811|GO:0016104|GO:0016866
Mtr4g0010 762 Gene3D - 69 223 - -
Mtr4g0010 762 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 351 756 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0010 Mtr-Chr4 122761 129753 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0010 K15813 - gmx:547702 1491.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0010 4 122761 129753 Mtr4g0010 4 122761 129753 ECH