Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0004 ATGGCGGCAACCCAACCACCACCACAGCCTCCTCTTGATCGTCCCACAACAGGAGATATATCAACTCAACCAGATAACATGAAGGATCAGATTGTGGGTACAACAACTATAGGTCATTCACGGGATATCACAAGTCAGTCAGGATCTTTTGGTTCAGGTGCAGATCAACCTCTGTACCCTCCCAATGTGTATGCGCCCCAGGCCCAGGCTTTCTACTATGGAGGTTTTGACAATGGCAATGGCGAATGGGATGAATATCCTTCATATGTCAATAATGGGGGAATCGAAATTGGATCTCCTGGTGTCTACAATGAAAATCAATCCCTTGTTTTCCATTCTGGATATGGCTTCAACCCACAAATGCCATATGGACCATATTCCCCGGTTACCTCGCCTTTGCCTTCTGTAGGTGGAGACGCACAGTTATACTCCCCTCAGCAATTTCCATACACCCCACCTTATTACAACCAGCTGGTTCCTCCTCCGAACTTACCATATCTTAATTCACCGACTCCAGTTTCTCAGCCAGAGCTTACTAACCTGCTAGGCATTGACCAGCAAGTTGAAAGTAATTTTTTTGGACCAAGAGCAAGCTATCCTTCCGTTGGATCTTTTGCTAGAGGAAGCTTTCCTGTAGCCCCTGGTTCCTTCAGCTTTCATGAATCTCAACAAGGATTTGATGGATCAAGATCTGGTGGTCTCTGGTCGGATTCCTCCAAACCTTCAGAAAGGCAGAGGTCTTTTATGCCTCTATCTCCTTCTGTTCCTCAACAGCCAATTGGCTCTGTCAGGTCATTTGGGCCGAGTGCTGGAATGGCTTCTCATCAACAGCGATCTTTGTATGGGTTTGGATCCAGTTCAAACCCTTATGGTAGAGGCTATCTCTCTAACCCTGGTTCTAGCTTTGGAGGCTCGGCCATTTCTGGCCTTAGTGCTAATGATAGGAGCTTCCTTTCTCTTGAAAATAGCAGACGGCACGGCAGGGAAACTGCTTCTTTTTGCAGATGTAATGGTACTCTTGATATCCTCAGTGAGCAAAACCGAGGACCAAGGGCTTCAAAGCTGAAAAATCATATATCCTCTGAAAATAACGCTATTGATGGTAGTAAAAATAATGCATCTACTGCCAAGTTCCAAGATGAATCACTCAACCGGCCAGATTTTGCCACTGATTTCAAGGATGCCAAGTTTTTTGTCATCAAATCTTATAGTGAAGATAACGTTCATAAGAGCATTAAGTATGGTGTCTGGGCTAGTACACCAAATGGAAACAGGAAGTTAGATGCTGCATATTGCCAAGCAAAGGAGAAACAAGATGCCTGCCGAATTTTTCTCTTTTTCTCGGTAAATGCTAGTGCTCAGTTCTGCGGAGTAGCTGAAATGGTTGGACCTGTCAATTTTGACAAGAGCGTGGACTTCTGGCAGCAAGATAAGTGGAGTGGGCAGTTTCCTGTGAAGTGGCACATAATAAAAGATGTTCCAAACAGTCAGTTTCGTCACATTGTTCTTGAAAATAATGATAACAAGCCCGTTACCAACAGTCGAGATACTCAGGAGGTGAAATTGCAACAAGGGATTGAAATGTTAACCATTTTTAAAAACTATGAAACTGATACGTCTATCCTGGATGATTTTGATTTCTATGAAGACCGGCAGAAGGCCATGCAAGAACGAAAGGCAAGGCAGCAAAGTAGCATAATGCCTACTGGATTAGTTGGGGGGAGTGAGCATAGGAGTTCTTCTGACAGTACTGGTGATTTCATCAAGCAAGTGTCAAAAAACTTTTCTCTAGTTGTCCGCTTGGACGACAACAATAACGAAGTTATTGCTGCCAACAGAGATAAGTTAGCCTCTGATGTTCCCACCGGTAATGTATTTAAACCCGGTGAAGGCATTTTAGTGACTGCCTCTTCAATGCAAACCAGTTAG 1929 0.4406 MAATQPPPQPPLDRPTTGDISTQPDNMKDQIVGTTTIGHSRDITSQSGSFGSGADQPLYPPNVYAPQAQAFYYGGFDNGNGEWDEYPSYVNNGGIEIGSPGVYNENQSLVFHSGYGFNPQMPYGPYSPVTSPLPSVGGDAQLYSPQQFPYTPPYYNQLVPPPNLPYLNSPTPVSQPELTNLLGIDQQVESNFFGPRASYPSVGSFARGSFPVAPGSFSFHESQQGFDGSRSGGLWSDSSKPSERQRSFMPLSPSVPQQPIGSVRSFGPSAGMASHQQRSLYGFGSSSNPYGRGYLSNPGSSFGGSAISGLSANDRSFLSLENSRRHGRETASFCRCNGTLDILSEQNRGPRASKLKNHISSENNAIDGSKNNASTAKFQDESLNRPDFATDFKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYCQAKEKQDACRIFLFFSVNASAQFCGVAEMVGPVNFDKSVDFWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLQQGIEMLTIFKNYETDTSILDDFDFYEDRQKAMQERKARQQSSIMPTGLVGGSEHRSSSDSTGDFIKQVSKNFSLVVRLDDNNNEVIAANRDKLASDVPTGNVFKPGEGILVTASSMQTS* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0004 642 Gene3D ph1033 like domains 371 547 - -
Mtr4g0004 642 MobiDBLite consensus disorder prediction 559 585 - -
Mtr4g0004 642 ProSiteProfiles YTH domain profile. 395 532 IPR007275 GO:0003723
Mtr4g0004 642 MobiDBLite consensus disorder prediction 221 259 - -
Mtr4g0004 642 Pfam YT521-B-like domain 395 533 IPR007275 GO:0003723
Mtr4g0004 642 MobiDBLite consensus disorder prediction 557 585 - -
Mtr4g0004 642 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 28 618 IPR045168 -
Mtr4g0004 642 MobiDBLite consensus disorder prediction 1 54 - -
Mtr4g0004 642 MobiDBLite consensus disorder prediction 15 53 - -
Mtr4g0004 642 PANTHER EVOLUTIONARILY CONSERVED C-TERMINAL REGION 5 28 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0004 Mtr-Chr4 79593 89577 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0004 K20102 - gmx:100816860 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0004 4 79593 89577 Mtr4g0004 4 79593 89577 ECH