Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0003 ATGATGACAGGGGAAGAAGTTGAAGGCTCAAGCAGCAGCTATACAGTAGATGAAGCTCTTATAACATTAGGTTTTGGAAAATTTCAAATACTCGTTCTTATTTACGCCGGCATTGGTTGGATTTCAGAAGCAATGGAAATGATGTTACTCTCATTTGTAGGTCCTGCAGTTCAATCTGCATGGAACCTTTCCTCTCATCAAGAAAGTTTCATAACAAGCGTTGTTTTTGCCGGAATGTTAATTGGTGCTTACTCATGGGGCATTGTTTCTGATCAACATGGAAGGAGAAAAGGATTTCTTATTACTGCTACTGTTACTGCTACTGCCGGTTTTTTTAGTTCTTTGTCCCCTAATTATGTCTCCTTGCTTGTTTTTCGTTCCCTTGTTGGTCTTGGTTTGGGAGGCGGTCCTGTGTTGTCCTCGTGGTTTCTTGAATTTGTTCCGGCTCCTAATAGAGGTACCTGGATGGTTGTGTTTTCCGGTTTTTGGACTGTTGGCACAATTTTTGAAGCATCACTTGCTTGGATTGTGATGCCAAGACTGGGTTGGAGATGGCTTCTTGCACTATCTTCCCTTCCCACATCTTTCCTTCTTCTGTTTTACAAAATGACACCAGAGTCACCAAGATACCTATGCTTGAAAGGTAGAACAACTGAAGCAATTGACGTTTTGGAGACAATATCAAGACTAAATGGCAAAAAGCTTCCTTCCGGTGTCCTTGTTTCTGACAATCAAATTGAGCTACAAAAAATTGACAACCCTTCAGAAGACACGGTTTTACTCTCCCCAAGAAAAAGTGAAGTTGAATCTCCTAAAGGAATGATTTCTAATTTAGGTGGTATCTCATCACTTCGAGTGCTCCTTTCACCCAAATTATCAAGGTCAACCCTTCTATTATGGGCAGTGTTTTTCGGTAATGCTTTTTCATATTATGGCCTTGTTTTGCTGACCTCCGAGTTGAAAAGAAATAGTAAATGTATCCCAGATAAATTGCAGACAGAGAAGTCCCAGGATGTAAGTTACAAAGGTGTTTTTATTGCTAGTTTTGCAGAGCTACCTGGGCTTCTCTTGTCAGCCGTAGCAGTGGATAAACTCGGTCGTAAGCTATCAATGTCGATCATGTTCTTCATGTGTTGTATTTTCCTTCTCCCATTAACATTCTATCTGCCTGAAGACCTAACAACGGGCCTTTTATTTGGAGCTCGCATATGCATCACAGTAACCTTCACAATCGTGTATATTTATGCCCCAGAGATATATCCCACATCAGTAAGAACCACCGGTGTCGGAGTCGCAAGCTCAGTGGGTAGAATTGGTGGAATGTTATGTCCATTGGTAGCAGTGGGTTTAGTACATGGATGTCATCAAACTGCAGCTGTCCTTCTGTTTATAATTGTAGCTCTTGTTTCAGGAATATGTGTTGTGTTCTTTCCGTTTGAGACCATGGGCCAAGAACTGCAAGATACTGTGTCAAGTATAAAGCAGACAGACGATGTGTAG 1500 0.4133 MMTGEEVEGSSSSYTVDEALITLGFGKFQILVLIYAGIGWISEAMEMMLLSFVGPAVQSAWNLSSHQESFITSVVFAGMLIGAYSWGIVSDQHGRRKGFLITATVTATAGFFSSLSPNYVSLLVFRSLVGLGLGGGPVLSSWFLEFVPAPNRGTWMVVFSGFWTVGTIFEASLAWIVMPRLGWRWLLALSSLPTSFLLLFYKMTPESPRYLCLKGRTTEAIDVLETISRLNGKKLPSGVLVSDNQIELQKIDNPSEDTVLLSPRKSEVESPKGMISNLGGISSLRVLLSPKLSRSTLLLWAVFFGNAFSYYGLVLLTSELKRNSKCIPDKLQTEKSQDVSYKGVFIASFAELPGLLLSAVAVDKLGRKLSMSIMFFMCCIFLLPLTFYLPEDLTTGLLFGARICITVTFTIVYIYAPEIYPTSVRTTGVGVASSVGRIGGMLCPLVAVGLVHGCHQTAAVLLFIIVALVSGICVVFFPFETMGQELQDTVSSIKQTDDV* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0003 499 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER-LIKE, MAJOR FACILITATOR SUPERFAMILY DOMAIN PROTEIN-RELATED 8 492 - -
Mtr4g0003 499 Gene3D MFS general substrate transporter like domains 26 491 IPR036259 -
Mtr4g0003 499 ProSiteProfiles Major facilitator superfamily (MFS) profile. 32 482 IPR020846 GO:0022857
Mtr4g0003 499 SUPERFAMILY MFS general substrate transporter 16 488 IPR036259 -
Mtr4g0003 499 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 8 492 - -
Mtr4g0003 499 Pfam Sugar (and other) transporter 62 487 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0003 Mtr-Chr4 72296 76736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0003 5 497 Organic Solute Cotransporters AT3G20660 25.919 9.32e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0003 - - mtr:MTR_4g005090 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0003 4 72296 76736 Mtr4g0003 4 72296 76736 ECH