Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0002 ATGAGTACCTCACCTTCAGCAACAACAATTGCTGCTGCTGTGTACTCAAAGTATAATAATATTAATACCACACTTTCAGTTTCAGGACAAATCAACACTACTTTCCTCTCCTACACCAAAAAGCAGCATACCCGCTCCTCCTCTGTACAACGATTACCTCCTATAGCCGCTGCTCCAAACACCAGGGATGGCAAAGACAGCAAGAGCAACACCCAAAACAACAACAACGACGACGACGACGACAACGATGACAAACAATCTGTCTCTCTTAGTCTCGACGACGTCAACCCGGTAGGACTTGGTCGAAAATCGCGGCAGATATTCGATGAGGTTTGGAGAAAATTCTCTGGACTGGGTCAGATCTCTAGGACTATACGTACTGATGATGTGGAGGCACTAGATGCTCTTCTTGTTCGTGAAGGTCCTATGTGTGAGTTTGCCATCCCTGGTGCTCAGAATACTACTGTACTTGTTGTTGGTGCTACTAGCCGTATCGGTCGCATCGTTGTTCGTAAGCTAATGCTCAGGGGTTACTCTGTCAAGGCTTTGGTAAGGAAGGCAGATGAAGAGGTGGTAGAGCTGCTTCCAAGGTCAGTAGAGATAGTGATTGGGGATGTTGGTGATCCAAACACTGTCAAGGCTGCTGTAGAAGGCTGCAACAAAATCATATATTGTGCCACTGCCCGCTCAACTATCACTGGTGATCTCTTCAGGGTTGATCAGCAAGGAGTTTATAATCTATCTAAAGCATTTCAGGATCACAACAATCAATTGGCTCAGTTGCGGGCAGGGAAAAGCAGCAAAAGTAAGCTTACAATTGCTAAATTTAAATCTGAATCTTCACTGGATGGATGGGAAGTTCGTCAAGGAACTTACTTCGAAGATGTAGTTACCTCAAAATATGATGGAGGGATGGATGCCAAATTTGAGTTCACTGAGAATGGAGCTGCTGTTTTCTCAGGGTATGTCTTCAATAGAGGTGGCTATGTAGAACTGTCAAAAAAGCTTTCTCTACCTTTGGGTAGTACTCTTGACAGGTATGAGGGCTTGGTTCTCTCTGTTGGCGGAAATGGAAGACCTTATGTATTAATTCTAGAAGCTGGTCCTTCAGGGGATCCAAGTCAGAGTAAATTGTATTTTGCAAGAATTAGTACAAAAGTGGGATTTTGTAGGGTTAGAGTGCCATTTTCATCATTTCGTCCTGTGAAACCAGATCATCCAGTTTTAGACCCTTTTCTTGTACATACATTAACAATACGGTTTGAGCCTAGAAGACAGAGGTCTGATATGGTAAATGCGTCAAAGAACCAGGATTCGAGAAGCTTTCAGCTAATATTGGAATATATAAAAGCCTTGCCTACTGGACAAGAAACCGATTTTGTCTTAGTTTCATGTTCTGGCCTTGGTATTGAGCCTTCCAGGCGGGAGCAAGTTCTTAAAGCCAAGAGGGCAGGTGAAGATTCTTTGAGAAGATCTGGGCTTGGATACACGATAGTTCGTCCGGGTCCATTGCAGGAAGAACCTGGTGGGCAGCGTGCTCTAATATTTGATCAAGGAGACAGAATATCTCGGGGCATCAGTTGTGCTGATGTAGCCGATATATGTGTGAAGGCACTCCATGATTCAACTGCAAGAAACAAAAGCTTTGATGTATGTTATGAGTACGTTGCTGAGGATGGGAATGAGCTTTATGAGCTGGTTGCCCACTTGCCGGATAAAGCAAATAACTACCTGACACCAGCTCTCTCTGTCTTGGAGAAGAATACTTGA 1770 0.4401 MSTSPSATTIAAAVYSKYNNINTTLSVSGQINTTFLSYTKKQHTRSSSVQRLPPIAAAPNTRDGKDSKSNTQNNNNDDDDDNDDKQSVSLSLDDVNPVGLGRKSRQIFDEVWRKFSGLGQISRTIRTDDVEALDALLVREGPMCEFAIPGAQNTTVLVVGATSRIGRIVVRKLMLRGYSVKALVRKADEEVVELLPRSVEIVIGDVGDPNTVKAAVEGCNKIIYCATARSTITGDLFRVDQQGVYNLSKAFQDHNNQLAQLRAGKSSKSKLTIAKFKSESSLDGWEVRQGTYFEDVVTSKYDGGMDAKFEFTENGAAVFSGYVFNRGGYVELSKKLSLPLGSTLDRYEGLVLSVGGNGRPYVLILEAGPSGDPSQSKLYFARISTKVGFCRVRVPFSSFRPVKPDHPVLDPFLVHTLTIRFEPRRQRSDMVNASKNQDSRSFQLILEYIKALPTGQETDFVLVSCSGLGIEPSRREQVLKAKRAGEDSLRRSGLGYTIVRPGPLQEEPGGQRALIFDQGDRISRGISCADVADICVKALHDSTARNKSFDVCYEYVAEDGNELYELVAHLPDKANNYLTPALSVLEKNT* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0002 589 SUPERFAMILY Galactose-binding domain-like 272 410 IPR008979 -
Mtr4g0002 589 MobiDBLite consensus disorder prediction 42 96 - -
Mtr4g0002 589 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 152 553 IPR036291 -
Mtr4g0002 589 Pfam Complex I intermediate-associated protein 30 (CIA30) 303 403 IPR013857 -
Mtr4g0002 589 Pfam NAD(P)H-binding 160 255 IPR016040 -
Mtr4g0002 589 Pfam NAD(P)H-binding 460 541 IPR016040 -
Mtr4g0002 589 PANTHER EPIMERASE-RELATED 65 588 - -
Mtr4g0002 589 Gene3D - 412 567 - -
Mtr4g0002 589 Gene3D - 151 261 - -
Mtr4g0002 589 PANTHER HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 65 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0002 Mtr-Chr4 62781 69303 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0002 - - gmx:100779812 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0002 4 62781 69303 Mtr4g0002 4 62781 69303 ECH