Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4489 ATGAGCGGAGCTGTTATTGTTGCTGTTGCCGCTGCTATCGGTAATTTACTCCAAGGATGGGATAATGCCACTATTGCAGGATCTATTTTATACATAAAGAGGGAATTTCAATTACAAAGTGAACCCACAGTCGAAGGTCTAATTGTGGCCATGTCACTTATAGGAGCCACCGTTGTTACTACATGCTCTGGAGCCCTATCAGACTTGTTTGGACGACGCCCCATGTTGATCATCTCCTCCCTCCTTTATTTTCTTAGTTCTCTTGTCATGTTTTGGTCTCCAAATGTTTATATCCTCCTCTTTGCAAGACTTTTAGATGGTCTCGGAATTGGTTTGGCAGTTACCTTGGTACCTCTTTACATATCCGAGATTGCCCCTCCTGAGATTAGAGGATCACTCAATACACTTCCTCAGTTCGCCGGTTCTGCTGGTATGTTTTTCTCCTACTGTATGGTCTTTGGGATGTCACTAACCAAGGCTCCAAGCTGGAGGCTTATGTTGGGTGTTCTTTCAATCCCCTCCCTTATTTATTTTGCACTCACACTATTGTTATTGCCCGAGTCTCCAAGATGGCTTGTCAGTAAAGGCCGAATGCTTGAGGCTAAGAAAGTTTTGCAGCGCCTTCGTGGATGCCAAGATGTTGCTGGTGAGATGGCTTTACTAGTGGAGGGTCTTGGAGTCGGGGGTGATACATCCATAGAAGAGTACATAATTGGTCCGGATAACGAATTAGCCGATGAAGAGGATCCATCTACCGGTAAAGATCAGATCAAGTTGTATGGGCCCGAACATGGTCAGTCCTGGGTTGCCAGACCTGTCACTGGACAGAGTTCCGTTGGCCTTGTATCTAGGAAAGGTAGCATGGCAAATCCGAGTGGTCTAGTGGATCCTTTGGTGACCCTATTTGGCAGTGTTCATGAGAAGCTCCCGGAGACTGGAAGCATGCGAAGCACTCTTTTTCCACACTTTGGAAGCATGTTCAGTGTTGGGGGAAATCAGCCTAGGAATGAAGACTGGGATGAAGAAAGTCTTGCCAGAGAGGGTGATGACTATATCTCTGATGCCGCTGCCGGTGATTCCGATGACAATTTACAGAGTCCGTTGATCTCACGTCAAACAACTAGTATGGACAAGGACATGCCTCTTCCTGCCCAGGGTAGCCTTTCAAACATGAGGCAAGGTAGTCTTTTACAAGGGAATGCAGGAGAACCTGTTGGGAGTACTGGAATTGGTGGTGGTTGGCAGTTAGCTTGGAAATGGTCTGAACAAGAAGGTCCAGGTGGAAAGAAGGAAGGTGGTTTCAAGAGAATATATTTACACCAAGAGGGTGGTCCTGGATCTATACGTGCGTCTGTCGTTTCACTTCCTGGCGGTGATGTGCCAACAGATGGTGATGTTGTACAGCAGGCTGCTGCTCTTGTGAGTCAACCAGCTCTTTATAACAAGGAGCTCATGCATCAACAGCCAGTTGGACCTGCTATGATTCATCCATCTGAAACAGCTGCAAAAGGGCCAAGTTGGAATGATCTTTTTGAACCGGGGGTGAAGCATGCATTGTTTGTAGGAGTGGGACTTCAAATTCTTCAGCAGTTCTCTGGTATAAATGGAGTCCTCTACTATACACCACAAATTCTTGAGCAGGCAGGTGTTGGATATCTTCTTTCAAACCTGGGCCTTAGTTCTACTTCATCATCTTTTCTAATTAGTGCAGTGACAACCTTGTTGATGCTTCCTTGTATAGCTGTTGCCATGAGGCTCATGGATATTTCTGGGAGAAGGACTTTGCTGCTCACTACAATCCCTGTCTTGATAGTATCTCTTTTCATATTAGTCCTAGGGAGCCTTGTGGATTTGGGCGACACTGCAAATGCGTCTATCTCAACCATTAGCGTTGTTGTCTATTTCTGTTCCTTTGTCATGGGATTTGGGCCAGTTCCTAATATACTTTGTGCTGAGATCTTCCCAACTCGAGTTCGTGGTCTTTGCATTGCCATTTGTGCTCTTACCTTTTGGATATGTGACATCATTGTCACCTATTCACTCCCAGTTATGCTGAATTCTGTAGGCCTTGGCGGTGTTTTTGGTTTGTACGCAGTTGTGTGCTGCATAGCTTGGGTGTTTGTGTTCTTGAAAGTTCCAGAAACCAAAGGCATGCCACTGGAAGTGATCATTGAGTTCTTCTCTGTCGGAGCAAAACAGATTGACGCGGCCAAGCATAACTGCGGCCAAGCATAA 2235 0.4591 MSGAVIVAVAAAIGNLLQGWDNATIAGSILYIKREFQLQSEPTVEGLIVAMSLIGATVVTTCSGALSDLFGRRPMLIISSLLYFLSSLVMFWSPNVYILLFARLLDGLGIGLAVTLVPLYISEIAPPEIRGSLNTLPQFAGSAGMFFSYCMVFGMSLTKAPSWRLMLGVLSIPSLIYFALTLLLLPESPRWLVSKGRMLEAKKVLQRLRGCQDVAGEMALLVEGLGVGGDTSIEEYIIGPDNELADEEDPSTGKDQIKLYGPEHGQSWVARPVTGQSSVGLVSRKGSMANPSGLVDPLVTLFGSVHEKLPETGSMRSTLFPHFGSMFSVGGNQPRNEDWDEESLAREGDDYISDAAAGDSDDNLQSPLISRQTTSMDKDMPLPAQGSLSNMRQGSLLQGNAGEPVGSTGIGGGWQLAWKWSEQEGPGGKKEGGFKRIYLHQEGGPGSIRASVVSLPGGDVPTDGDVVQQAAALVSQPALYNKELMHQQPVGPAMIHPSETAAKGPSWNDLFEPGVKHALFVGVGLQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLSSTSSSFLISAVTTLLMLPCIAVAMRLMDISGRRTLLLTTIPVLIVSLFILVLGSLVDLGDTANASISTISVVVYFCSFVMGFGPVPNILCAEIFPTRVRGLCIAICALTFWICDIIVTYSLPVMLNSVGLGGVFGLYAVVCCIAWVFVFLKVPETKGMPLEVIIEFFSVGAKQIDAAKHNCGQA* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4489 744 CDD MFS_GLUT_like 517 714 - -
Mtr3g4489 744 SUPERFAMILY MFS general substrate transporter 6 721 IPR036259 -
Mtr3g4489 744 PANTHER TONOPLAST MONOSACCHARIDE TRANSPORTER 2 1 733 - -
Mtr3g4489 744 Gene3D MFS general substrate transporter like domains 3 257 IPR036259 -
Mtr3g4489 744 Pfam Sugar (and other) transporter 7 222 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mtr3g4489 744 Pfam Sugar (and other) transporter 503 724 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mtr3g4489 744 ProSitePatterns Sugar transport proteins signature 2. 105 130 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr3g4489 744 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr3g4489 744 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr3g4489 744 PRINTS Sugar transporter signature 529 539 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr3g4489 744 PRINTS Sugar transporter signature 628 649 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr3g4489 744 PRINTS Sugar transporter signature 651 663 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr3g4489 744 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 716 IPR020846 GO:0022857
Mtr3g4489 744 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr3g4489 744 Gene3D MFS general substrate transporter like domains 500 737 IPR036259 -
Mtr3g4489 744 PANTHER - 1 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4489 Mtr-Chr3 58885635 58891461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4489 1 740 Organic Solute Cotransporters AT4G35300 72.507 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4489 - - mtr:MTR_3g118530 1411.74