Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4488 ATGGCGAAATTTTGGTGTGATTTTCGGTTTCTTCTCTTTGTTGCAGCCTTGGTGTTCATCTACATCCAGATGAGACTTTTCGCATCACAATCACAATATGCTGATCGCCTCGCTGCTGCTATTGAAGCTGAAAATCACTGTACAGCTCAAATCCGATCACTCATTGATCAGATTAGCTTGCAACAAGGACGCATTCTCGACTTACAACAAGAAAGGAACCGTCGAGAGCAAGAATGTAGCCAAATCAAGTCTCTTGTTCAAGATCTTGAAAGAAAAGATGTACGAAGGCTGATTGATAAAGTCCAGGTTCCAGTGGCAGCTGTTGTCATCATGGCATGTAATCGTGCTGATTACCTGGAGAGGACTATCAATTCTGTATTGAAATATCAAAGGCCCATTTCTTCAAGATTTCCTTTATTTGTATCACAGGATGGATCAAATTCAGACGTCAAAAGAAAGGCTCTGAGCTACGATGAGCTATCTCATATGCAGCACTTAGATTTTGAGCCGGTTCAAACTGAAAGGCCAGGAGAGTTAATTGCTTACTATAAGATTGCACGTCATTACAAGTGGGCTCTTGGTCAACTGTTCGACAAGCATAACTTCAACAGAGTCATCATTCTCGAAGATGACATGGAAATAGCACCTGATTTCTTTGATTATTTTGAAGCTATGGCAACTCTCCTTGACAAGGATAAGTCCATTATGGCTGTTTCGTCATGGAATGACAATGGACAGAAGCAGTTTGTACATGATCCATATGAACTTTATCGCTCGGACTTCTTTCCTGGACTAGGATGGATGCTGGCTAGATCTACATGGGATGAACTATCACCAAAATGGCCGAAGGCCTACTGGGACGATTGGTTGAGATTAAAAGAGAATCACAAAGGACGACAATTTATCCGACCCGAAGTATGCAGAACATATAATTTTGGAGAACATGGCTCTAGTTTGGGACAGTTTTTTAAGCAATATCTTGAGCCAATCAAGCTGAATGAAGTCCAGGTCGACTGGAAGTCAATGGACTTGAGCTATTTGTTGGAGGACAAATATGTTATACACTTCGCCAACATTATTAAAAAAGCTAAACCTGTCTCTGGAGCAGACTTCGCTCAGAAGGCACGCAATATAGACGGTGATGTGCGTATAAAGTATAAAGATCAGTGGGACTTTGAAAACATTGCTCAACAATTTGGTATATTTCAAGAGTGGAAGGATGGTGTGCCTAGGACAGCTTATAAAGGAGTAGTCGTTTTCAGATATCAAACCACGAAGCGTATATTCCTTGTTGGCCCAGAATCTTTGAAGCTACTTCAGATTGAATAA 1329 0.4101 MAKFWCDFRFLLFVAALVFIYIQMRLFASQSQYADRLAAAIEAENHCTAQIRSLIDQISLQQGRILDLQQERNRREQECSQIKSLVQDLERKDVRRLIDKVQVPVAAVVIMACNRADYLERTINSVLKYQRPISSRFPLFVSQDGSNSDVKRKALSYDELSHMQHLDFEPVQTERPGELIAYYKIARHYKWALGQLFDKHNFNRVIILEDDMEIAPDFFDYFEAMATLLDKDKSIMAVSSWNDNGQKQFVHDPYELYRSDFFPGLGWMLARSTWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFKQYLEPIKLNEVQVDWKSMDLSYLLEDKYVIHFANIIKKAKPVSGADFAQKARNIDGDVRIKYKDQWDFENIAQQFGIFQEWKDGVPRTAYKGVVVFRYQTTKRIFLVGPESLKLLQIE* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4488 442 Coils Coil 72 92 - -
Mtr3g4488 442 CDD GT13_GLCNAC-TI 105 435 - -
Mtr3g4488 442 Gene3D - 364 440 - -
Mtr3g4488 442 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 104 327 IPR029044 -
Mtr3g4488 442 PANTHER ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE-RELATED 1 441 - -
Mtr3g4488 442 SUPERFAMILY Nucleotide-diphospho-sugar transferases 107 440 IPR029044 -
Mtr3g4488 442 PANTHER PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 441 - -
Mtr3g4488 442 Pfam GNT-I family 15 440 IPR004139 GO:0006486|GO:0008375
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4488 1 441 Glycosyltransferase AT4G38240 69.388 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4488 K00726 - gmx:100795005 800.816