Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4483 ATGGTTATCCATTCCTTGATTAATAATTATTCAGGTTTGGCGGTTCCACTCTTCCCATTGCTGCTTCCGCTTCCAAAACTTGCTATTCCCTCTGCTACTTCTACTTCCACTTCTACCGCAGCAGCAGCAGCAGGAGGATTTATCTCTTTCAAACAACTACATCTACGTCGTCGTCTTCTTCTTCCCTTCTGTACATCATCGTCGTTGTCATCACCGAACTCGCAAGACAATGATAGTAATTGTGTGAGTGGAGATTCCATACGGGAAAGATTTCTTAGTTTTTATGCTTCCCGTGGTCACAAGGTCCTTCCCAGTGCTTCTCTCGTTCCAGATGACCCTACTGTTCTCCTCACCATTGCTGGTATGCTTCAATTCAAACCTATCTTTCTTGGAAAACTTCCTAGACAAGTCCCTCGTGCTACTACTTCACAACGCTGCATCCGTACTAATGATATCAACAATGTTGGTCATACCTCACGACATCATACCTTCTTTGAGATGCTTGGTAACTTCAGCTTTGGTGATTATTTCAAAAAACAAGCTATTCAATGGGCATGGGACTTATCTACCATTGAGTTTGGTTTGCCTCCAGAAAGATTATGGATTAGTGTTTACCAAGACGATCATGAGACTTTCCAGTTATGGTCTCAACAGGTTGGTGTCCCCGTTGAGCGAATTAAGAGGTTGGGTGAAGAGGATAACTTTTGGACAAGCGGAGTCACCGGTCCCTGCGGTCCTTGCTCTGAAATTTATTATGATTTTCATCCTGAGAGGGGATACGCCGATGCTCAGGATCTTGGTGATGATACACGGTTTATAGAGTTCTACAATTTAGTATTCATGCAATACAACAAAAAAGACGATGGTTCTCTCGAACCTCTAAAGCAGAAGAACATAGATACTGGGCTTGGTCTGGAGCGCATGGCTCGCATTCTTCAAAAGGCTCCAAATAACTATGAAACTGACTTGATTCTCCCCATCATAGAGAAGGCCTCTGAATTAGCAAATATTTCATATGGCATATCTGATGACCAGACAAAGAGGTATCTGAAAATAGTAGGAGATCACATGCGTGCAATTGTGTTTCTCATCTCTGATGGCGTTGTACCATCAAACGTTGGGAGGGGTTATGTAGTTCGACGGCTTATCAGAAGAGTTGTTCGTACAGGCAGGTTGCTTGGTATAAAAGGTGATGGTAGGGGAGACCCTGAAGGAGCATTTTTACCTATAATTGCTCAGAAAGTATTAGAGTTAAGCACTCACATTGATGCTGATGTGAAGAATAGAGCACCCCGTATCCTTGAGGAGTTGAAGAGAGAAGAGCTTCGATTTGTGCAGACGCTGGAGAGAGGAGAGAAATTGCTTGAGGAGAAGCTTGTTGATGCTATAACAAGTGCTGAAAGAAGTGGAACTGTACCTTGCTTGGCTGGTGAAGATGTGTTTATTTTGTATGATACTTATGGTTTCCCTATGGAAATAACAAAAGAAGTGGCTGAAGAACGCGGTGTGAGTATTGACATGAATGGTTTTGATATTGAGATGGAGAAGCAAAGACGTCAATCTCAAGCTGCACACAATACTGTCAAGCTTGCCATTGGAAGCGGGACAAATATTGCAGACAATGTACCTGACACTGAATTTATTGGATATGAAAGTCTTTATTGTAAAGCAATTGTAGCAAGCCTAGTGGTAAATGGTGATCCAGCTGTACAGGTTAGGGAAGGGAGTAATGTGGAAATTTTGCTGAACAAGACTCCATTTTATGCTGAATCAGGAGGACAAATTGGAGATCATGGTTTTCTGTATATAGCAGAGGGTGAGAATCAACCTAAGGCTATTGTGGAGATAATAGATGTTCAAAAGTCTTTTGGTAATATATTTGTTCACAAGGGTACAGTCCAAAAGGGTGTTCTAGAGGTTGGCAAACTAGTGGAAGCAACAGTGGATGTAAAGTTGAGGCAACGGGCCAAGGTTCATCATACCGCTACTCATTTACTACAAGCAGCGCTTAAAAAGGTCATCGGTCAGGAGACCTCTCAAGCTGGTTCTTTGGTGGCATTTGATCGTCTCAGGTTTGATTTCAATTTCCACCGTCCACTCCTTGATGGCGAGCTTGCAGAAATCGAACTGCTGATCAACGGATGGATTGAGGATGCGATTCTTCTTCAGACCAAAGTGATGCCTCTTGCTGATGCAAAAAGAGAAGGCGCAATTGCAATGTTTGGAGAAAAATACGGGGAAGAGGTACGTGTTGTAGAGGTCCCTGGAGTATCGATGGAACTTTGTGGTGGGACTCATGTCAGTAATACTTCTGAAATTCGTGGTTTTAAAGTAATTTCAGAGCAGGGTATTGCATCTGGTGTCAGGCGAATAGAAGCTGTAGCTGGGGAAGCTTTCATTGAATATGTCAATGCTCGAGATTTATATCTGAAACAGCTATGTTCCACTCTCAAAGTTAAACCTGAAGAAGTAACTGTGAGGATAGAAAACCTTTTAGAGGAGTTACGGGTAGCAAGAAACGAGAATTCGGCTGTGCGTGCAAAAGCAGCAGTCTACAAAGCTTCAGTTATTGCAAGCAGAGCGTTTTTGGTGGGGCATTCAAAACAGTACAGGATACTAGTTGAGTGTTTGGATGATGTTGATGCAGAGTCACTTAAAAGTGCCGCAGAATATTTAATGGAAACACTAGCAGATCCAGCAGCTATTGTCCTGGGCTCATGTCCAGGTGAAGGGAAGGTTAGTTTAGTGGCTGCTTTTACTCCAGGGGTGGTTGGTCAGGGAATTCAGGCAGGTAAATTTATTGGACAGATAGCAAAATTATGTGGTGGTGGAGGAGGTGGAAGGCCCAACTTCGCTCAGGCTGGTGGGAGGAAGCCTGAAAATTTGGCTGGTGCCCTCGAGAAAGCTAAGTCAGAGCTTATAGCTTATCTTTGTGAAAAAGGGAACTGA 2949 0.4313 MVIHSLINNYSGLAVPLFPLLLPLPKLAIPSATSTSTSTAAAAAGGFISFKQLHLRRRLLLPFCTSSSLSSPNSQDNDSNCVSGDSIRERFLSFYASRGHKVLPSASLVPDDPTVLLTIAGMLQFKPIFLGKLPRQVPRATTSQRCIRTNDINNVGHTSRHHTFFEMLGNFSFGDYFKKQAIQWAWDLSTIEFGLPPERLWISVYQDDHETFQLWSQQVGVPVERIKRLGEEDNFWTSGVTGPCGPCSEIYYDFHPERGYADAQDLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERMARILQKAPNNYETDLILPIIEKASELANISYGISDDQTKRYLKIVGDHMRAIVFLISDGVVPSNVGRGYVVRRLIRRVVRTGRLLGIKGDGRGDPEGAFLPIIAQKVLELSTHIDADVKNRAPRILEELKREELRFVQTLERGEKLLEEKLVDAITSAERSGTVPCLAGEDVFILYDTYGFPMEITKEVAEERGVSIDMNGFDIEMEKQRRQSQAAHNTVKLAIGSGTNIADNVPDTEFIGYESLYCKAIVASLVVNGDPAVQVREGSNVEILLNKTPFYAESGGQIGDHGFLYIAEGENQPKAIVEIIDVQKSFGNIFVHKGTVQKGVLEVGKLVEATVDVKLRQRAKVHHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDGELAEIELLINGWIEDAILLQTKVMPLADAKREGAIAMFGEKYGEEVRVVEVPGVSMELCGGTHVSNTSEIRGFKVISEQGIASGVRRIEAVAGEAFIEYVNARDLYLKQLCSTLKVKPEEVTVRIENLLEELRVARNENSAVRAKAAVYKASVIASRAFLVGHSKQYRILVECLDDVDAESLKSAAEYLMETLADPAAIVLGSCPGEGKVSLVAAFTPGVVGQGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGRKPENLAGALEKAKSELIAYLCEKGN* 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4483 982 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 749 792 IPR012947 GO:0004812|GO:0005524|GO:0043039
Mtr3g4483 982 SUPERFAMILY Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 320 529 IPR018162 GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419
Mtr3g4483 982 TIGRFAM alaS: alanine--tRNA ligase 87 956 IPR002318 GO:0000166|GO:0005737
Mtr3g4483 982 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 82 805 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
Mtr3g4483 982 SUPERFAMILY ThrRS/AlaRS common domain 648 807 IPR018163 GO:0000166
Mtr3g4483 982 Coils Coil 828 848 - -
Mtr3g4483 982 Hamap Alanine--tRNA ligase [alaS]. 83 977 IPR023033 GO:0004813
Mtr3g4483 982 Gene3D - 659 794 - -
Mtr3g4483 982 PRINTS Alanyl-tRNA synthetase signature 150 161 IPR002318 GO:0000166|GO:0005737
Mtr3g4483 982 PRINTS Alanyl-tRNA synthetase signature 273 284 IPR002318 GO:0000166|GO:0005737
Mtr3g4483 982 PRINTS Alanyl-tRNA synthetase signature 300 313 IPR002318 GO:0000166|GO:0005737
Mtr3g4483 982 PRINTS Alanyl-tRNA synthetase signature 351 367 IPR002318 GO:0000166|GO:0005737
Mtr3g4483 982 PRINTS Alanyl-tRNA synthetase signature 375 388 IPR002318 GO:0000166|GO:0005737
Mtr3g4483 982 Gene3D Bira Bifunctional Protein; Domain 2 82 315 IPR045864 -
Mtr3g4483 982 Gene3D - 720 773 - -
Mtr3g4483 982 SUPERFAMILY Translation proteins 543 648 IPR009000 -
Mtr3g4483 982 Gene3D - 535 648 - -
Mtr3g4483 982 SUPERFAMILY Class II aaRS and biotin synthetases 84 319 IPR045864 -
Mtr3g4483 982 Pfam DHHA1 domain 829 971 IPR003156 GO:0003676
Mtr3g4483 982 Pfam tRNA synthetases class II (A) 87 650 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
Mtr3g4483 982 PANTHER ALANINE--TRNA LIGASE, MITOCHONDRIAL 83 972 - -
Mtr3g4483 982 SMART tRNA_SAD_4 749 792 IPR012947 GO:0004812|GO:0005524|GO:0043039
Mtr3g4483 982 CDD AlaRS_core 85 314 - -
Mtr3g4483 982 Hamap Probable alanine--tRNA ligase, chloroplastic. 71 979 IPR027522 GO:0009507
Mtr3g4483 982 Gene3D - 796 857 - -
Mtr3g4483 982 Gene3D - 866 973 - -
Mtr3g4483 982 PANTHER ALANYL-TRNA SYNTHETASE 83 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4483 Mtr-Chr3 58812538 58821220 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4483 K01872 - gmx:100817906 1573.53