Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4477 ATGGAAGGGAAGAGAAGCTTGCGTATGTGCTGTTTATGCAATGAAAGAAGAGCTTCTCTGAAGAGACCTAAAACCCTTCAACAGATTTGCAGAGAATGCTTCTACCTTGCTTTCGAAGATGAGATTCATCAACTCATCGTCGATAACCGCCTCTTCACCCGCGGCGACCGAATCGCCATCGGAGCTTCCGGCGGTAAAGACTCCACCGTCCTCGCTTACGTCTTATCCAAACTCAACCGCGTTCACGATTACGGCCTCCATCTATTCCTTCTCTCCGTCGACGAGGGCATCACCGGGTACCGCGACGATTCTCTTGAAACCGTTCATAGAAATCAGATTGAGTACGGATTGCCTCTCAAAATTGTATCCTACAAGGATTTGTACGGTTGGACGATGGACGAGATCGTGAAACTGATTGGTCTGAAGAACAATTGCACCTTCTGTGGAGTGTTCCGTCGGCAGGCACTGGATCGAGGAGCGGCATTCCTGAAAGCAGATAAAGTGGTGACTGGGCACAACGCGGACGACATAGCTGAGACCGTGCTGTTAAACATATTAAGAGGAGATATAGCTAGACTGAGCAGATGCAGTTCAATCATAACAGGTGAAGATGGACCCATCCCTAGATGCAAACCTTTCAAGTACACTTATGAAAAGGAAATTGTTATGTATGCTTATTTCAAGAAGCTTGACTACTTTTCCACTGAATGCATTTATTCTCCAAATGCTTACCGTGGTTTTGCTCGTGAGTTCATCAAGGATTTGGAGAGAATCAGACCCAGGGCAATCCTCGACATCATCAAATCAGGGGAGAATTTCAGGATTTCTACGACCACCAAAATGCCTGAACAGGGATTTTGTGAACGCTGTGGTTATATTTCTAGTCAGAAATGGTGTAAAGCTTGTGTTCTGCTTGATGGATTGAATCGAGGTTTGCCTAAATTGGGAATTGGACGGAGTCGGGTTGCCATTGGTTTCAAGGAAGAAAATAAAAGCCATGGAACAAAGAGCATTGAGAGCAAACAATGTGGATCTTTAGACTTCTGA 1047 0.4537 MEGKRSLRMCCLCNERRASLKRPKTLQQICRECFYLAFEDEIHQLIVDNRLFTRGDRIAIGASGGKDSTVLAYVLSKLNRVHDYGLHLFLLSVDEGITGYRDDSLETVHRNQIEYGLPLKIVSYKDLYGWTMDEIVKLIGLKNNCTFCGVFRRQALDRGAAFLKADKVVTGHNADDIAETVLLNILRGDIARLSRCSSIITGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGENFRISTTTKMPEQGFCERCGYISSQKWCKACVLLDGLNRGLPKLGIGRSRVAIGFKEENKSHGTKSIESKQCGSLDF* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4477 348 PANTHER ATPASES OF THE PP SUPERFAMILY-RELATED 8 338 - -
Mtr3g4477 348 CDD Alpha_ANH_like_II 57 243 - -
Mtr3g4477 348 Gene3D HUPs 9 333 IPR014729 -
Mtr3g4477 348 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 43 274 - -
Mtr3g4477 348 Hamap Cytoplasmic tRNA 2-thiolation protein 1 [CTU1]. 8 320 IPR000541 GO:0000049|GO:0002098|GO:0034227
Mtr3g4477 348 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 1 8 338 IPR000541 GO:0000049|GO:0002098|GO:0034227
Mtr3g4477 348 TIGRFAM TIGR00269: TIGR00269 family protein 207 306 IPR000541 GO:0000049|GO:0002098|GO:0034227
Mtr3g4477 348 PIRSF ATPase_YdaO 5 317 IPR035107 GO:0008033
Mtr3g4477 348 Pfam PP-loop family 58 245 IPR011063 -
Mtr3g4477 348 Pfam Zinc-ribbon 285 315 IPR032442 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4477 K14168 - gmx:100816096 620.928