Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4476 ATGTCTATCATTTCTTCTCCATTCTCCATTTCAATACCTTGTTCTAATTCTTCTTCTTCTTCTTCACTTTCCTTCTCAACTTCTTTTTCTGCTCAATTTGTGAAATTGCAGCAGCACCAAAGAAAAAGAGGAGGAGCGATGGTGGTGAAAATGAGCTTAGAGGCTGGTGTTGGTGTCATGGGTACCAAATTGGGAATGATGAGCTTTTTCCAACCTAACGGTGAAGTAGTTCCCGTCACTGTTGTCGGTTTCAAAGAAGGCAACATCGTCACTCAGATCAAAACCGACGCCACTGACGGTTACAACGCCGTACAAGTTGGTTACCGGAGGGTTAGAGACCGCAAATTGACCAAACCTGAAATGGGTCATCTTGAAAAGGCCGGAGCCATTCCTATGCGCCATCTTCAGGAGTTTCGTCTTCAATCCGTTGATGGTTTTGAACCTAATCAGCGCCTTGTCTTTGATGAGCTTTTCAATGAAGGAGATCTTGTTGATGTCTCCGGCACCACCATCGGCAAGGGTTTTCAAGGTGGTATCAAGCGTCATAACTTCAAAAGAGGACCAATGAGCCATGGTTCCAAGAGTCACAGACAACTTGGATCCATTGGTGCCGGAACTACACCTGGTCGCGTATACAAGGGAAAGAAGATGCCTGGTAGGATGGGTGGAACTAACAGGAAGACCAGAAAGCTTAAGATTGTTAAAATTGATAAAGATCTTAATGTTATCATGATCAAAGGTGCTCTTCCTGGTAAGCCTGGTAATCTTCTACGTATAGCCCCCGCCAAGATTGTTGGCAAGAACATTCCAAAGAATTAA 819 0.442 MSIISSPFSISIPCSNSSSSSSLSFSTSFSAQFVKLQQHQRKRGGAMVVKMSLEAGVGVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKTDATDGYNAVQVGYRRVRDRKLTKPEMGHLEKAGAIPMRHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQGGIKRHNFKRGPMSHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTNRKTRKLKIVKIDKDLNVIMIKGALPGKPGNLLRIAPAKIVGKNIPKN* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4476 272 PANTHER 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC 51 271 - -
Mtr3g4476 272 SUPERFAMILY Translation proteins 57 268 IPR009000 -
Mtr3g4476 272 Hamap 50S ribosomal protein L3 [rplC]. 56 263 IPR019927 GO:0003735|GO:0005840|GO:0006412
Mtr3g4476 272 TIGRFAM L3_bact: 50S ribosomal protein uL3 58 259 IPR019927 GO:0003735|GO:0005840|GO:0006412
Mtr3g4476 272 Gene3D Translation factors 184 264 - -
Mtr3g4476 272 Pfam Ribosomal protein L3 152 238 IPR000597 GO:0003735|GO:0005840|GO:0006412
Mtr3g4476 272 ProSitePatterns Ribosomal protein L3 signature. 158 181 IPR019926 -
Mtr3g4476 272 Gene3D - 89 148 - -
Mtr3g4476 272 PANTHER 50S RIBOSOMAL PROTEIN L3 51 271 IPR019927 GO:0003735|GO:0005840|GO:0006412
Mtr3g4476 272 MobiDBLite consensus disorder prediction 177 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4476 Mtr-Chr3 58757969 58759124 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4476 K02906 - jre:109021071 426.787