Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4457 ATGACTCCCACTCACAATCTCGCCTTCCTTTCCATATTATTAGTTCTCTTACCAGCCATTGTCGCAGCACATGATCATGGTCGTGTTGCAGGCATTAACAATGTTACTTATGATGGTAAATCACTCTTTGTCAATGGAAGACGCGAGCTCCTCTTCTCCGGTTCCATCCATTACACTCGCAGCACCCCTGATGCGTGGCCAGACATTCTTGATAAGGCAAGACATGGAGGTTTGAACGTTATTCAAACTTACGTGTTTTGGAACGCTCATGAGCCAGAGCAAGGCAAGTTCAATTTTGAAGGCAACAATGATTTGGTGAAGTTCATTAGGCTTGTTCAATCAAAAGGAATGTACGTGACCCTCAGGGTTGGACCGTTCATCCAAGCCGAATGGAACCACGGAGGACTTCCATATTGGCTAAGAGAGGTTCCAGGGATCATATTCCGCTCTGACAATGAACCCTACAAGAAATACATGAAAGCATACGTGTCAAAAATTATCCAAATGATGAAAGATGAGAAGCTCTTTGCTCCCCAAGGAGGCCCCATCATCTTGGCACAAATTGAAAATGAGTACAACCATATTCAACTTGCTTATGAAGAGAAGGGAGATAGTTATGTTCAGTGGGCCGCAAATATGGCAGTGGCCTTGGACATCGGAGTTCCGTGGATCATGTGCAAGCAGAAGGATGCTCCCGATCCCGTCATCAATGCATGCAATGGAAGACATTGTGGTGATACCTTCTCAGGACCAAACAAACCATACAAGCCTTCCCTATGGACTGAAAATTGGACCGCTCAGTACAGAGTATTTGGTGATCCAGTATCACAGAGATCTGCTGAAGATATTGCCTTCTCAGTTGCCCGATTCTTCTCCAAAAATGGAAATCTGGTCAACTACTATATGTACCATGGTGGAACAAACTTTGGAAGAACAACCTCTGCCTTTACAACAACCCGTTATTACGATGAGGCACCTCTTGATGAATACGGTATGGAGAGGCAGCCAAAATGGAGCCACCTTAGGGACGCCCACAAGGCTTTGCTCCTTTGCAGAAAGGCTATTCTCGGTGGTGTTCCCACTGTCCAAAAGCTCAACGACTACCACGAGGTTAGAATCTTTGAGAAGCCTGGAACAAGCACATGTTCTGCTTTTATCACCAATAACCACACTAATCAAGCAGCCACAATTAGTTTCAGAGGTTCTAACTACTTTTTGCCAGCACATTCCATTAGCGTCCTCCCAGATTGCAAGACTGTCGTCTACAACACACAAAATATTGTTTCACAACATAATAAAAGGAACTTCGTGAAGTCTGCTGTCGCAAACAACCTCAAATGGGAGCTGTTTCTTGAGGCAATTCCATCATCTAAGAAACTTGAATCAAATCAAAAAATTCCATTAGAGCTTTACACATTGCTTAAAGACACCACAGATTATGGATGGTACACCACCAGCTTTGAGTTGGGTCCAGAAGACTTGCCAAAGAAGAGTGCAATTCTTCGTATTATGAGTCTTGGACACACACTATCCGCATTTGTTAATGGACAATACATTGGTACTGATCATGGTACCCATGAAGAAAAATCTTTTGAATTTGAGCAACCAGCTAACTTCAAGGTTGGAACCAACTACATTTCCATCTTGGCTACCACTGTTGGACTACCTGACAGTGGAGCTTATATGGAGCATAGGTACGCCGGACCCAAGTCCATATCCATCCTTGGTCTCAATAAAGGAAAACTTGAACTCACTAAGAACGGTTGGGGTCATCGGGTTGGTCTCAGAGGTGAGCAACTTAAAGTTTTCACCGAGGAAGGATCAAAGAAGGTTCAATGGGATCCAGTCACAGGAGAAACACGTGCACTCTCCTGGTTGAAGACAAGATTTGCCACACCAGAGGGAAGAGGTCCAGTTGCCATCAGGATGACTGGTATGGGAAAAGGAATGATTTGGGTGAACGGAAAAAGCATCGGTCGTCACTGGATGTCATTCCTCTCCCCTCTTGGACAACCTAGTCAAGAAGAGTACCACATCCCAAGAGATTACCTGAATGCAAAGGACAATTTGCTTGTTGTATTAGAAGAGGAGAAGGGAAGTCCAGAAAAAATAGAGATAATGATTGTTGACAGAGATACAATCTGCAGTTACATTACAGAGAACAGTCCTGCCAATGTCAATTCTTGGGGATCTAAGAACGGAGAATTTCGTTCTGTTGGCAAAAATTCTGGACCACAAGCTTCACTGAAATGTCCCAGCGGCAAAAAGATTGTTGCTGTCGAGTTTGCAAGCTTTGGTAATCCTAGTGGTTACTGTGGAGATTTTGCTCTTGGAAATTGTAACGGTGGTGCTGCTAAGGGTGTTGTTGAGAAGGCATGCTTGGGGAAAGAAGAATGTTTGGTTGAAGTGAACCGTGCAAACTTCAACGGTCAGGGCTGCGCAGGTTCAGTGAATACACTTGCTATCCAAGCTAAGTGTTCCTACTAG 2487 0.4419 MTPTHNLAFLSILLVLLPAIVAAHDHGRVAGINNVTYDGKSLFVNGRRELLFSGSIHYTRSTPDAWPDILDKARHGGLNVIQTYVFWNAHEPEQGKFNFEGNNDLVKFIRLVQSKGMYVTLRVGPFIQAEWNHGGLPYWLREVPGIIFRSDNEPYKKYMKAYVSKIIQMMKDEKLFAPQGGPIILAQIENEYNHIQLAYEEKGDSYVQWAANMAVALDIGVPWIMCKQKDAPDPVINACNGRHCGDTFSGPNKPYKPSLWTENWTAQYRVFGDPVSQRSAEDIAFSVARFFSKNGNLVNYYMYHGGTNFGRTTSAFTTTRYYDEAPLDEYGMERQPKWSHLRDAHKALLLCRKAILGGVPTVQKLNDYHEVRIFEKPGTSTCSAFITNNHTNQAATISFRGSNYFLPAHSISVLPDCKTVVYNTQNIVSQHNKRNFVKSAVANNLKWELFLEAIPSSKKLESNQKIPLELYTLLKDTTDYGWYTTSFELGPEDLPKKSAILRIMSLGHTLSAFVNGQYIGTDHGTHEEKSFEFEQPANFKVGTNYISILATTVGLPDSGAYMEHRYAGPKSISILGLNKGKLELTKNGWGHRVGLRGEQLKVFTEEGSKKVQWDPVTGETRALSWLKTRFATPEGRGPVAIRMTGMGKGMIWVNGKSIGRHWMSFLSPLGQPSQEEYHIPRDYLNAKDNLLVVLEEEKGSPEKIEIMIVDRDTICSYITENSPANVNSWGSKNGEFRSVGKNSGPQASLKCPSGKKIVAVEFASFGNPSGYCGDFALGNCNGGAAKGVVEKACLGKEECLVEVNRANFNGQGCAGSVNTLAIQAKCSY* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4457 828 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 180 192 IPR019801 GO:0004553|GO:0005975
Mtr3g4457 828 Pfam Beta-sandwich domain in beta galactosidase 356 427 IPR041392 -
Mtr3g4457 828 Pfam Galactose binding lectin domain 749 826 IPR000922 GO:0030246
Mtr3g4457 828 Gene3D - 592 719 - -
Mtr3g4457 828 SUPERFAMILY Galactose-binding domain-like 411 569 IPR008979 -
Mtr3g4457 828 Gene3D Glycosidases 32 350 - -
Mtr3g4457 828 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 11 824 - -
Mtr3g4457 828 Gene3D - 736 828 IPR043159 -
Mtr3g4457 828 PRINTS Glycosyl hydrolase family 35 signature 45 62 IPR001944 GO:0004553|GO:0005975
Mtr3g4457 828 PRINTS Glycosyl hydrolase family 35 signature 66 84 IPR001944 GO:0004553|GO:0005975
Mtr3g4457 828 PRINTS Glycosyl hydrolase family 35 signature 121 140 IPR001944 GO:0004553|GO:0005975
Mtr3g4457 828 PRINTS Glycosyl hydrolase family 35 signature 178 193 IPR001944 GO:0004553|GO:0005975
Mtr3g4457 828 PRINTS Glycosyl hydrolase family 35 signature 259 274 IPR001944 GO:0004553|GO:0005975
Mtr3g4457 828 PRINTS Glycosyl hydrolase family 35 signature 296 311 IPR001944 GO:0004553|GO:0005975
Mtr3g4457 828 PRINTS Glycosyl hydrolase family 35 signature 315 331 IPR001944 GO:0004553|GO:0005975
Mtr3g4457 828 PRINTS Glycosyl hydrolase family 35 signature 621 635 IPR001944 GO:0004553|GO:0005975
Mtr3g4457 828 PRINTS Glycosyl hydrolase family 35 signature 648 664 IPR001944 GO:0004553|GO:0005975
Mtr3g4457 828 ProSiteProfiles SUEL-type lectin domain profile. 741 827 IPR000922 GO:0030246
Mtr3g4457 828 SUPERFAMILY Galactose-binding domain-like 587 734 IPR008979 -
Mtr3g4457 828 Gene3D - 360 568 - -
Mtr3g4457 828 SUPERFAMILY (Trans)glycosidases 34 351 IPR017853 -
Mtr3g4457 828 PANTHER BETA-GALACTOSIDASE RELATED 11 824 IPR001944 GO:0004553|GO:0005975
Mtr3g4457 828 Pfam Glycosyl hydrolases family 35 41 347 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4457 Mtr-Chr3 58587412 58591337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4457 35 826 Glycoside Hydrolase AT2G16730 59.675 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4457 - - gmx:100791456 1305.43