Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4377 ATGGCATCCATTTCATGGTTCAGCTGTCTACACATCCGACCAACAGCCACTGCCGGCGACAAAGGTTTATCATCTCCCATAACCGTGGAACATCATAAAACAAGACCACAAAATTTACTCTCATCCTCGGAAGAAGGACTTGCGATTAATAGAAGACAACTAATTCTTTACACATCCACTGCAGCAATTGCAGCTTCATCTACTGACTCAAATGCATTGGCACTCAATGATGTATCTGAGGATTTTAGTATCTACACTGATGATGAGAACAAGTTCAAGATAGATATTCCACAAGAGTGGCAAATTGGAACAGGAGAGTCTGCAGGGTTCAAATCATTAACTGCTTTCTACCCAAAAGAGCAATCTAATTCCAATGTGAGCGTTGTGATCACAGGAGTGGGTCCAGATTTCACTAAGATGGAATCATTCGGCAAAGTTGAAGAATTTGCTGACACTCTGGTTAGTGGGTTGGATAGAAGCTGGAAAAAACCACCTGGTGTGGCTGCTAAACTCATAGATTGTAAATCATCTAAAGGATTTTATTTCATTGAGTATACGCTGCAAAGTCCTGGTGAGGGTCGCAAACATCTATATTCAGCTATTGGGATGTTAACAAATGGCTGGTATAACAGACTGTATACAGTGACAGGACAGTATGGGGAAGAGGAAACAGACAAGTATGCTTCCAAAATTCAGAAGGCAGTTCGATCGTTTAAGTTCATATAA 726 0.4091 MASISWFSCLHIRPTATAGDKGLSSPITVEHHKTRPQNLLSSSEEGLAINRRQLILYTSTAAIAASSTDSNALALNDVSEDFSIYTDDENKFKIDIPQEWQIGTGESAGFKSLTAFYPKEQSNSNVSVVITGVGPDFTKMESFGKVEEFADTLVSGLDRSWKKPPGVAAKLIDCKSSKGFYFIEYTLQSPGEGRKHLYSAIGMLTNGWYNRLYTVTGQYGEEETDKYASKIQKAVRSFKFI* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4377 241 Pfam PsbP 81 240 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Mtr3g4377 241 SUPERFAMILY Mog1p/PsbP-like 82 240 IPR016123 -
Mtr3g4377 241 PANTHER - 38 241 - -
Mtr3g4377 241 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 38 241 - -
Mtr3g4377 241 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 70 240 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4377 - - lja:Lj1g3v3404330.1 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4377 3 57690766 57693024 Mtr3g4377 3 57690766 57693024 ECH