Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4369 ATGATGACGATGATGATGAGGTTGAATCTGCTGCTTTCATTTCTTTTGACATTTACCATTCTATCCTCCCATGTCCTCTCCGATCTCATCCTTACCAAAGTTGACCGTCGTATTGATCTGTCATCACAAATTGTCCGTACCACTACTACTCTTAAGGTAGAGAATGCAGGATCTGATATAGTTTCAGAAATCTTGTTGACCTTTCCTGATAACCATGTAAAGCACTTGGCATACTTGTCAGCAACACTTAACGAAGGAAAGGGAAAGGCGAAATCATTTTCTGGGGTTGGTTTACCATATGAAGTTGTCCGCCCTAAAGATATTCCCTCTTCCTTGGCAACTTATTCCGTAACTTTACCTAAAGGCCTTGGGAAGGCAGAAAGTTTGACGATGGACATCTTGACAGTTTTTACCCATATATTGCAACCATTTCCAGAGAAAATTACGCAAGCTGACATTCAACTTCTGCTGTTTCAAGAGAGTGCACAATATCTTTCTCCTTATCCCGTGAAGGTCCAATCGCTCAATGTTAAATTACCTGAGGCAAGAATAGAGTCCTACACAAAGTTGGAAAATACAAAACTTCAGGGATCTGAATTGAAATACGGTCCATATGAGAATCTTCCTCCATTCTCATACTTGCCAATTGTTATCCATTTTGAGAATAATCAGCCCTTCGCCGTTGCTAAAGAGTTGGTGAGGGAGATTGAGATATCCCATTGGGGCAATGTACAGATCACAGAGCATTATAATCTTGTTCATGGCGGTGCTCAGAGCAAAGGAGAATTTTCCAGACTTGACTATCAGGCCAGGCCATATGTAAGAGGTGCATCTGCCTTTAGGCGTCTTACTGCCAAGCTGCCACCAAGAGCTCATTCTGTTTACTACAGGGATGAAATCGGCAATATTTCCACTTCTAGTTTGTGGGGCGACTCAAAAAAGACAGAACTTGAGATCGAACCTAGGTACCCACTTTTTGGTGGCTGGAAAACTGCTTTTACCATTGGATATGGGTTGCCACTTCAGGACTTCTTGTTTGGAGTCGATGGAAAGCGCTTCCTTAATATCTCTTTTGGTTCCCCCATTAATGAGTTGGTGATTGACACTCTTGTTGTGAAGGTTGTCTTGCCAGAGGGTTCAAAAGATATTTCACCATCTGTTCCATTTCCTGTGAAAGAAAGACATGAGACAAAGTTTTCACACTTGGATATTGCTGGTAGACCTGTTGTTGTGCTAGAGAAGAACAACGCTGTGCCTGAGCATAATGAGCATTTTCAGGTCTATTATAAGTTCAACCGTCTTTCTATGCTCAGGGAGCCGTTAATGTTGATTTCCGGCTTTTTCTTTCTATTTCTTGCCTCCATTGTCTACATGCATGCAGACTTATCAATCTCCAAGACTTCTGCATCTTATTTGGCAAAGATCCAATGGGAAGAGGTTCAAGCAACTATTCATCAGGTCCATAGTATCGTTAGTCGTTGCTTAACAACACACGACAAGCTAGAAGCATCGTTGCGTGATCTTTCTAGGACAGGTGATATTCAAGGGTGTAAAGCAACCAGAAAATCAGTTGATAGCTCGTTGAAAGAGCTCACAAAGGAGTTGAAATCACCTGTGACATTTTTGCAGTCTTCTCCTCAAGCCGCTCAAATATTACCCAAGGTGGAGGAAGTAATTGCTAAGGAGAGAGATTTGCAGGAGAAGCTTATGGCAAAACACTCTACTGTTGTTGATTGTTATGAGAAGAAGTTAGGAGGAAGGGAAATTGAAAATCGGATTGCTTCACATCAGCAGAAAATTACAGCTCTGAAACAAGAGATTGACGATCTTATGGACTTGATCGATGAGATATGA 1854 0.4159 MMTMMMRLNLLLSFLLTFTILSSHVLSDLILTKVDRRIDLSSQIVRTTTTLKVENAGSDIVSEILLTFPDNHVKHLAYLSATLNEGKGKAKSFSGVGLPYEVVRPKDIPSSLATYSVTLPKGLGKAESLTMDILTVFTHILQPFPEKITQADIQLLLFQESAQYLSPYPVKVQSLNVKLPEARIESYTKLENTKLQGSELKYGPYENLPPFSYLPIVIHFENNQPFAVAKELVREIEISHWGNVQITEHYNLVHGGAQSKGEFSRLDYQARPYVRGASAFRRLTAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPLFGGWKTAFTIGYGLPLQDFLFGVDGKRFLNISFGSPINELVIDTLVVKVVLPEGSKDISPSVPFPVKERHETKFSHLDIAGRPVVVLEKNNAVPEHNEHFQVYYKFNRLSMLREPLMLISGFFFLFLASIVYMHADLSISKTSASYLAKIQWEEVQATIHQVHSIVSRCLTTHDKLEASLRDLSRTGDIQGCKATRKSVDSSLKELTKELKSPVTFLQSSPQAAQILPKVEEVIAKERDLQEKLMAKHSTVVDCYEKKLGGREIENRIASHQQKITALKQEIDDLMDLIDEI* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4369 617 Pfam Ribophorin I 31 457 IPR007676 GO:0006486|GO:0016021
Mtr3g4369 617 Coils Coil 586 617 - -
Mtr3g4369 617 PANTHER RIBOPHORIN I 6 595 IPR007676 GO:0006486|GO:0016021
Mtr3g4369 617 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1 6 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4369 Mtr-Chr3 57625298 57631640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4369 26 555 Miscellaneous Gene Families AT1G76400 68.113 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4369 K12666 - gmx:100817203 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4369 3 57625298 57631640 Mtr3g4369 3 57625298 57631640 ECH