Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4366 ATGGGTAGACGCCATGGATGGGAACTCCCTTTTCACACTTTTCAGGTCGTGGCTATTACGGTTTTTTTCTTGCTATGCATTGCATATTATGCCTTCTTTGCTCCTTTTCTTGGAAAGGACATCTTTGAATTCGTCGCTTTTGGTGTTTACTCTCTACTGGCACTTTCTGTATTCTTTCTATATGTTCGATGCACTGCCATTGACCCCGCTGATCTAGGAGTAATGATTGATTGCGATAAAACATCCAAGAATAGATCAAAACTTGATGAAGAGTTGGCAGAACCCAGCAAGACAAGGCTAAAGGATGATGGAATATCTGATCAGCATGATTCAAATGGGTGCTCGAAACTTGGATGTTGCCTGTGTAGTTTCCTTGCTAGAGAAGATTGCCGTAGCGATGAAGATTTTATTCTTCAGCAACAATCTGGAGAGGAGGATGCTTTGTTCTGTACTTTATGCAATGCTGAGGTTCGGAAGTTCAGTAAGCATTGTAGAAGTTGTGACAAATGTGTTGATGGATTTGATCACCATTGCCGGTGGTTGAACAATTGCGTCGGAAGGAAGAACTACATCTCATTTGTGTGCCTAATGGCTGTGAGCCTGGTTTGGCTTTTAGTTGAATGCGGAGTCGGGATTGCTGTGCTTGTCAGATGCTTTGTTGATAAGAAGGATACAGAAAATCTGATAGCTGTAAAGCTTGGAGCTGGATTCTCTCGAGCCCCATTTGCTACAATAGTGGCCATATGCACAGCAGTTTCTTTCCTTGCGATTATACCTCTGGGAGAATTATTCTTTTTTCATATGATCCTGATCCGAAAGGGTATTACAACGTACGAATATGTCGTTGCTATGAGAACTTTGACTGAACCACCTGGTCCTTCAGTTGATGCGGGTGAGCAGCAGAGTCTACCTTCATCTCCTACTGGTTCATCTGTCACTGCAATAAGCGGAAGAAGCTCTGTTGGAATGAGTTTGCAAATCAAAGGTGCCTGGTGTACACCTCCAAGAATCTTTATGGATCAACAGGATGAAATTATACATCATTTGGAGCCTGGCCGCTTACCATCTACTGTGGATCCAGATGCAATACAACCACCTGACAAGGGGAAAAAATTGAACCAGCGCCCTGTGCGAATAAGCGCATGGAAACTTGCAAAATTAGATTCCAATGAAGCAGCTAAGGCATTAGCTAAAGCTCGAGCATCGTCGTCTGTGCTTCGTCCAATTAGTTCTCGATCTCATGCATATGATGTCGATCATTTATCAAGTAGCAATTTGAGTGGAAGAAGCAGCCCTATTAGTAACCGAGGATTTCATAACAAATATGATCAAGCAGGGACATCAAGGTTATCTCCTTCCAAGAGTTCATACCCTCCCAGTCAAGCAAGCAGGGAAGATTTAGATGCGTGCCACCACAGTATGAGTAACTTGAGCAGTCCACAAGTGTCCAACATATCTCCTTCGCCAATGCAGAGGCCAGGTTTGAACAGAGACCATTTCAACCCCATGTATCAGCAACCATCTATAAATCAGTCTCCTTCATCAGTTAGAGGAAGTGAAGGGAGTGTAAATCCAGTTCATGAAAATGGTGCACGTGTGGCAATGAGGAATAACAGCTTAGCTGTTTTAGAGGATAGAAGGTCGTCAGTGTTTTGGGATCAAGCAGCTGGTCGCTTTGTCCCGAACCCATCTAGAGCTCAAGGCAGTTCTCAGATTCCTGGAACAGAGTTAACATACAGCGGCCGTTCTATATTTTTTGGCAGTCCTGCTGTGAGTGAACAGTCAAATGCAGGAACAAGAAATAGTAGCTCAGTAGCTGGTGTTTCGGACAGAGATAATACTATAAGGGATTTTCAGCAAGGTAGATCACATAGAGGTGCCCAGCTTCCTGTGTTCGTTCCCAGTTATTCCCAGCAAAACAAGTTCTCTTAG 1932 0.4363 MGRRHGWELPFHTFQVVAITVFFLLCIAYYAFFAPFLGKDIFEFVAFGVYSLLALSVFFLYVRCTAIDPADLGVMIDCDKTSKNRSKLDEELAEPSKTRLKDDGISDQHDSNGCSKLGCCLCSFLAREDCRSDEDFILQQQSGEEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYISFVCLMAVSLVWLLVECGVGIAVLVRCFVDKKDTENLIAVKLGAGFSRAPFATIVAICTAVSFLAIIPLGELFFFHMILIRKGITTYEYVVAMRTLTEPPGPSVDAGEQQSLPSSPTGSSVTAISGRSSVGMSLQIKGAWCTPPRIFMDQQDEIIHHLEPGRLPSTVDPDAIQPPDKGKKLNQRPVRISAWKLAKLDSNEAAKALAKARASSSVLRPISSRSHAYDVDHLSSSNLSGRSSPISNRGFHNKYDQAGTSRLSPSKSSYPPSQASREDLDACHHSMSNLSSPQVSNISPSPMQRPGLNRDHFNPMYQQPSINQSPSSVRGSEGSVNPVHENGARVAMRNNSLAVLEDRRSSVFWDQAAGRFVPNPSRAQGSSQIPGTELTYSGRSIFFGSPAVSEQSNAGTRNSSSVAGVSDRDNTIRDFQQGRSHRGAQLPVFVPSYSQQNKFS* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4366 643 MobiDBLite consensus disorder prediction 351 373 - -
Mtr3g4366 643 MobiDBLite consensus disorder prediction 420 462 - -
Mtr3g4366 643 MobiDBLite consensus disorder prediction 589 643 - -
Mtr3g4366 643 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 9 486 - -
Mtr3g4366 643 MobiDBLite consensus disorder prediction 472 491 - -
Mtr3g4366 643 PANTHER PROTEIN S-ACYLTRANSFERASE 21 9 486 - -
Mtr3g4366 643 MobiDBLite consensus disorder prediction 420 492 - -
Mtr3g4366 643 Pfam DHHC palmitoyltransferase 146 282 IPR001594 GO:0016409
Mtr3g4366 643 MobiDBLite consensus disorder prediction 298 315 - -
Mtr3g4366 643 ProSiteProfiles DHHC domain profile. 148 198 - -
Mtr3g4366 643 MobiDBLite consensus disorder prediction 589 614 - -
Mtr3g4366 643 MobiDBLite consensus disorder prediction 291 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4366 Mtr-Chr3 57609879 57615502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4366 149 279 Lipid Metabolism Gene Families AT4G22750 29.771 1.40e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4366 K20027 - gmx:100818808 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4366 3 57609879 57615502 Mtr3g4366 3 57609879 57615502 ECH