Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4360 ATGTTTTCTGAAAGATCGGGGGCAGAAGAATCTCGTTGTCAAGAAGATTTCCACGGTTTTAGTGTGTCCAAGCGTCTTGTTAGAAGTGTCAGCCAGAAGTTGAGGAAGAAGAATAATAACAGAAGTTTAGGGGAAGAAGATGATGATGTAAATGGAGTCAATTTTAAATGTCTAAGTCTGTATGGTCGGGGTGGAGGTTGCAAGGTAGGTGCTGACACTAGTGAAGAATTAGGAGATTCGAGCACAAGAAGGAGATCTAGTTCCAGTGAAGAAGGAAAGGGATATAGACCGGTTTGTGGTCCCCAAGATACTGCTGTTGTAGACTGCTTCTCATATGGGGTGAGAGATAGGTTTTGGAGGAGACACCACAGAAAGAATTCTGAACTTGATGAATTGTTAACAACAAACAATAAAATGCATGTCTTTCTTCCAGATGATATTCTGGAAATGTGTTTGGTGAGGCTTCCGTTGACAAGTTTGATGAATGCCCGACTTGTTTGCAAAAAATGGAGGTCCTTGACCACCACACCTAGATTCCTCCAGCTGAGAAGGGAGGGCTTGTATCAAAATCCATGGTTATTTCTGTTTGGTGCCGTTAAAGACGGCTTTTGCTCTGGTGAGATACATGCGTTGGATGTGTCTCAGAATCAATGGCACAGGATCGAGGCTGGTTTTCTCAGAGGAAGGTTCTTGTTCTCTGTTGCTAGTGTACAAGATGATATCTTCATTGTTGGAGGATGTTCTAGCTTGACTAACTTTGGGAAAGTGGATCGGAGCTCATTCAAGACGCACAGAGGGGTGCTTTCATTTAGCCCCTTGACAAAATCTTGGCGTAAAATATCAGCTATGAAGTATGCTAGATCAATTCCTATACTGGGAGTCTTTGAAGTCAGTTTGGATTTTCCAAGTTCTCAAAGCCATCAGAGTCGGCAGGACAGACGTTTTCCAAGATCGAAGATTGGTGGGGTATCAGACGTCTATGAGGATCCTCATAAGCTTTCAATGAGACGTCATTGCAGATCAACCTTTAATGAGACGGAAGCTTCATCATTGTCTAGTAGAAAGGCGCATAAATTCATGAGACAAATAAGCGATCTTTCAAGCTCAAAGAGTAGTAGAAGGTTTTTGTTGATAGCTGTTGGAGGTCTTGGATCTTGGGATGAGCCTCTGGACTCGGGAGAAATATATGATTCTATCTCCAATAAATGGACTGAAATCCCAAGACTGCCTTTTGATTTTGGGATTGCTTGTTCTGGAGTTGTATGTGGCAAGATGTTTTATGTTTACTCTGAAACAGACAAGCTTGCAGCATATGACATAGAACGAGGTTTCTGGATTGCAATTCAAGCCACTCCGATCCCACCTCGTGTACATGAGTACTACCCCAAACTTGTATCTTCAAAAGGTCGTCTGTTCATGCTTTCCGTGTCATGGTGCGAAGGTGATGGTCAAATTGGGCGCCGAAACAAGGCTGTTAGAAAATTATGGGAGTTAGATCTCATGTATCTTACCTGGACTGAAGTCTCTGTACATCCTGATGCCCCAATGGACTGGAATGCTGTATTTGTGGCCGACAAAAACTTGATTTTTGGAGTTGAGATGTTCAAAATATTTGGCCAGGTGTTGGATTTTTTCACTGTATGTGATGTGACTGATATGTCAAACTGGAACCATATTTCAAGGAACCATGTCACTCATGAGCTGGATGGTTCATCGTGTGTGACCAAATCTGTAGCAGTAATGCACCTTTGA 1752 0.4252 MFSERSGAEESRCQEDFHGFSVSKRLVRSVSQKLRKKNNNRSLGEEDDDVNGVNFKCLSLYGRGGGCKVGADTSEELGDSSTRRRSSSSEEGKGYRPVCGPQDTAVVDCFSYGVRDRFWRRHHRKNSELDELLTTNNKMHVFLPDDILEMCLVRLPLTSLMNARLVCKKWRSLTTTPRFLQLRREGLYQNPWLFLFGAVKDGFCSGEIHALDVSQNQWHRIEAGFLRGRFLFSVASVQDDIFIVGGCSSLTNFGKVDRSSFKTHRGVLSFSPLTKSWRKISAMKYARSIPILGVFEVSLDFPSSQSHQSRQDRRFPRSKIGGVSDVYEDPHKLSMRRHCRSTFNETEASSLSSRKAHKFMRQISDLSSSKSSRRFLLIAVGGLGSWDEPLDSGEIYDSISNKWTEIPRLPFDFGIACSGVVCGKMFYVYSETDKLAAYDIERGFWIAIQATPIPPRVHEYYPKLVSSKGRLFMLSVSWCEGDGQIGRRNKAVRKLWELDLMYLTWTEVSVHPDAPMDWNAVFVADKNLIFGVEMFKIFGQVLDFFTVCDVTDMSNWNHISRNHVTHELDGSSCVTKSVAVMHL* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4360 583 PANTHER OS09G0555300 PROTEIN 1 583 - -
Mtr3g4360 583 SUPERFAMILY F-box domain 142 205 IPR036047 GO:0005515
Mtr3g4360 583 Gene3D - 349 568 IPR015915 GO:0005515
Mtr3g4360 583 MobiDBLite consensus disorder prediction 77 91 - -
Mtr3g4360 583 PANTHER OS09G0555300 PROTEIN 1 583 - -
Mtr3g4360 583 Gene3D - 154 296 IPR015915 GO:0005515
Mtr3g4360 583 Pfam Kelch motif 377 410 IPR006652 GO:0005515
Mtr3g4360 583 ProSiteProfiles F-box domain profile. 137 182 IPR001810 GO:0005515
Mtr3g4360 583 Pfam F-box domain 143 179 IPR001810 GO:0005515
Mtr3g4360 583 SMART fbox_2 143 183 IPR001810 GO:0005515
Mtr3g4360 583 SMART kelc_smart 240 297 IPR006652 GO:0005515
Mtr3g4360 583 SMART kelc_smart 376 423 IPR006652 GO:0005515
Mtr3g4360 583 MobiDBLite consensus disorder prediction 25 46 - -
Mtr3g4360 583 SUPERFAMILY Kelch motif 377 531 IPR015915 GO:0005515
Mtr3g4360 583 MobiDBLite consensus disorder prediction 72 97 - -
Mtr3g4360 583 SUPERFAMILY Kelch motif 190 294 IPR015915 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4360 - - ccaj:109802378 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4360 3 57556912 57559945 Mtr3g4360 3 57556912 57559945 ECH