Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4353 ATGGAAGAAGGAAAAGAAGTGATACCCCTCCTCATCCCATACAACATGGGAAAATTCAATCTGTCCCACAGGATAGTCCTGGCACCATTAACAAGAACAAGGTCATTCAATTTCGTGGCTCAACCACATGCTGCTCTTTATTATTCTCAACGAACAACAAAGGGTGGCTTCTTGATTGGGGAAGCCTCAGGGGTCTCAGACACTGCACAAGGGTACCCAAATACACCTGGTATTTGGACAAGAGAACAAGTGGAAGCATGGAAACCCATTGTTGGAGCTGTTCATGAGAAAGGAGGCATATTCTTTTGTCAACTTTGGCACGCCGGAAGAGTCTCAAACTATGGTTACCAACCAGATGGACAGCCTCCAATCTCAAGCACAAATAAGGCACTACAAAAGGAAGGTAGCGGCAGCACTAAGTACCCACCTCCTCGACGTCTCACAACCGATGAAATCCCAAAAATTGTCAACGACTTCAGACTGGCAGCCAAAAATGCCATAGATGCAGGTTTTGATGGAGTGGAGATACATGGAGCTAATGGATACTTGCTTGATCAATTCCTAAAGGACAAAGTGAACGATAGAGATGACGAGTATGGAGGGAGCTTAGAAAATCGTTGTCGCTTCCCTCTAGAGGTTGTGAAAGCAGTTGTTGATGAGATTGGAGCTGACAAAGTTGGTGTTAGACTTTCACCTTATGCTGATTATTGTGGTTGTGGAGACTCTAACCCTCATGCTTTAGGCATCTACATGGCTAAGTCATTAAGTCAATTAGGCATTCTCTATTGTCATGTCATTGAACCTGGGATGTGCACCATGTTTGAAAAATATGACACCAATGAGTCCTTAATGCCCATGAGAAAGATCTTCAATGGAACATTTATTGTTGCTGGTGGATACAATAGGACTGAAGGAAACAATGTGTTGGCCAGCAATGGTGCGGATTTGGTAGCTTATGGAAGGCTCTTTTTGGCAAATCCTGATCTGCCTAGAAGATTTGAATTGGATACCCAATTGAACAAGGCTGATAAGAGCACTTTTTACACCAATGATCCTGTTGTTGGATATACTGATTATCCATTTCTTGAAAATGCTAGCTAG 1101 0.4305 MEEGKEVIPLLIPYNMGKFNLSHRIVLAPLTRTRSFNFVAQPHAALYYSQRTTKGGFLIGEASGVSDTAQGYPNTPGIWTREQVEAWKPIVGAVHEKGGIFFCQLWHAGRVSNYGYQPDGQPPISSTNKALQKEGSGSTKYPPPRRLTTDEIPKIVNDFRLAAKNAIDAGFDGVEIHGANGYLLDQFLKDKVNDRDDEYGGSLENRCRFPLEVVKAVVDEIGADKVGVRLSPYADYCGCGDSNPHALGIYMAKSLSQLGILYCHVIEPGMCTMFEKYDTNESLMPMRKIFNGTFIVAGGYNRTEGNNVLASNGADLVAYGRLFLANPDLPRRFELDTQLNKADKSTFYTNDPVVGYTDYPFLENAS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4353 366 CDD OYE_like_FMN 9 343 - -
Mtr3g4353 366 MobiDBLite consensus disorder prediction 118 135 - -
Mtr3g4353 366 PANTHER NADH OXIDOREDUCTASE-RELATED 6 364 IPR045247 GO:0010181|GO:0016491
Mtr3g4353 366 SUPERFAMILY FMN-linked oxidoreductases 10 363 - -
Mtr3g4353 366 PANTHER 12-OXOPHYTODIENOATE REDUCTASE-LIKE PROTEIN 6 364 - -
Mtr3g4353 366 Gene3D Aldolase class I 2 366 IPR013785 -
Mtr3g4353 366 MobiDBLite consensus disorder prediction 117 148 - -
Mtr3g4353 366 Pfam NADH:flavin oxidoreductase / NADH oxidase family 10 336 IPR001155 GO:0010181|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4353 Mtr-Chr3 57504760 57508382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4353 3 366 Acyl Lipid Metabolism Gene Families AT1G76690 67.120 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4353 K05894 - gmx:100790284 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4353 3 57504760 57508382 Mtr3g4353 3 57504760 57508382 ECH