Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4351 ATGGGCGAGGTATCTGAAACAACCATGACGACGACGACGACGACAAAGAGGAAGAAGAAGGGTCGTCCATCTCTGTTGGATCTTCAAAAACGATCTCTCAAAAAACAACAAAAACAAAACCCCAATTTAATCAACGATCCATATTCCAACAACAACGATGATGAAGATGAACGCAAACAAAAGAAACAAAAACTCTTAATTGGTTTGAATTCTCATCTCCAAAACCCAACTACATTATTCTCCAATTCTCAAACTCCCCAATTTCACCCTAATCACCCCGGATCAGATCAAAACGATGGAAAGGTTCCGAAAGCGACTGACAGTAAACATGGTTCGCAGGTTATGTCTGGTCCCACTACACCTTTGCCAGACAAAAAGCTCTTGCTGTTTATCCTTGACAGACTTCAAAAAAAGGACACACATGAGGTATTCTCTGAGCCTGTGGATCCAGAAGAGCTTCCTGATTATCATGATATCGTTAAAAACCCGATGGATTATGGAACTATAAGGAAGAAATTGGATGGGGGATTATATATCAGCCTTGAACAGTTTGAGAATGACGTGTTCTTGGTATGCTCTAATGCAATGCTATACAATTCACCAGATACCATTTACCATCGTCAGGCCCGAGCAATGCAAGAGATAGCAAGGAAGGATTTTGAGAATCTGAGACAAGATAGTGATGATGATGACGACGAGGATGATGATAATGACAGTGAACCACCACAACCCAAAATTGTGCAGAGGGGAAGGCCACCAGGCAAGCGCTCAAAAAAGTCATTGGGCATGTCACCAATAGAGTTTGCTGCTCCTGAATCTTTGTCTGATGCAACTCTTGCTTCTGGTGGGGATACGGCTAGTGGCTCCAATGGTTATAATCTAAGAAAAGCAGTAAGCAAATTTCAGCCGACAGATTCATCAGCCAGGGGTCTCCAATACAACAGTGGAGGTTATACAAGTTGGACGTCTGAATGGGAGAATGAATTTCCAGCTTCTGTTTTAAAAGCTGTGTTAAGGTATGGAAAGAAGCAGTACACGGTTGATGAGACCAGGCGTGACACTTACAGAAATCCAGTTGCTGTAGGAAATGAACCACCAGTATTGACTGCATTTGAGGATAATTCCAAGCAGCTTCTTGCAGTTGGTTTACATGTGAAGCACAGCTATGCAAGAAGCCTAGCCCATTTTGCTGCAGACCTTGGTCCTGTTGTTTGGAAGGTTGCTGCTAGGAAAATCAGTAGTGCTTTGCCACCAGGACATGAATTTGGTCCTGGATGGGTATCTGATGATGATGTGTCGCAGAGGCAACACTTTGCGGTTCGTGATGAGAGAAATTCAGACACTCCTGTACCAGAGGATTATAGAAGCAGATTTCCTTCTCCGTCAAGAACGTTCTCTCATGCAAATACATCAGGCTTGCAAAGTGGAGACGTGTTGATAAACAGAGAACCGAGTTACCAAAACGAAATGAATCCAGGCAGCAGTGTTAGTGGTGGGAACGAATCCATGATTCATGGGAGGATTCAGCAGGAACCCATGGCGCACTCTGATGATTTCGGTTCTAATCGTCGGTTAGGATCTAATTTTTCACCTCAGATGACGATGGTAAGCCTTGCCGACTTAACTGGGTCTTCAAATGCTGGTAATGTTCCTCAAATGTTTGGCATGGATACCACAAACAGCCTTTCCGGTCATATTGCACCTACAAATATAAATCCGACAGCTCTCAAGGCTCAATTCTTTAACAAGTCGAGTCAGTCAGATTCCAGCAACTTATTAGCTCTGGAATCTGGATTTGATCCACAAAGATTTTCTCAAGGGCTTACCGGAAAATCATCTTGGCAAGGATTGGAAGTTCCTACTAAACAGAATTCCGTTTCACTTGCTACTGACCTAAATGGGATAATAGGGGCAACAAGTTCACGCAGTTCCAATGTGGAGACTGGTCCTCAGCTGCAGCCAAATCTTGCACTGCAGCTATGA 1983 0.4352 MGEVSETTMTTTTTTKRKKKGRPSLLDLQKRSLKKQQKQNPNLINDPYSNNNDDEDERKQKKQKLLIGLNSHLQNPTTLFSNSQTPQFHPNHPGSDQNDGKVPKATDSKHGSQVMSGPTTPLPDKKLLLFILDRLQKKDTHEVFSEPVDPEELPDYHDIVKNPMDYGTIRKKLDGGLYISLEQFENDVFLVCSNAMLYNSPDTIYHRQARAMQEIARKDFENLRQDSDDDDDEDDDNDSEPPQPKIVQRGRPPGKRSKKSLGMSPIEFAAPESLSDATLASGGDTASGSNGYNLRKAVSKFQPTDSSARGLQYNSGGYTSWTSEWENEFPASVLKAVLRYGKKQYTVDETRRDTYRNPVAVGNEPPVLTAFEDNSKQLLAVGLHVKHSYARSLAHFAADLGPVVWKVAARKISSALPPGHEFGPGWVSDDDVSQRQHFAVRDERNSDTPVPEDYRSRFPSPSRTFSHANTSGLQSGDVLINREPSYQNEMNPGSSVSGGNESMIHGRIQQEPMAHSDDFGSNRRLGSNFSPQMTMVSLADLTGSSNAGNVPQMFGMDTTNSLSGHIAPTNINPTALKAQFFNKSSQSDSSNLLALESGFDPQRFSQGLTGKSSWQGLEVPTKQNSVSLATDLNGIIGATSSRSSNVETGPQLQPNLALQL* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4351 660 MobiDBLite consensus disorder prediction 459 473 - -
Mtr3g4351 660 MobiDBLite consensus disorder prediction 75 120 - -
Mtr3g4351 660 MobiDBLite consensus disorder prediction 1 62 - -
Mtr3g4351 660 Pfam Bromodomain 131 210 IPR001487 GO:0005515
Mtr3g4351 660 Coils Coil 658 660 - -
Mtr3g4351 660 MobiDBLite consensus disorder prediction 641 660 - -
Mtr3g4351 660 ProSitePatterns Bromodomain signature. 141 198 IPR018359 -
Mtr3g4351 660 MobiDBLite consensus disorder prediction 224 261 - -
Mtr3g4351 660 PRINTS Bromodomain signature 139 152 IPR001487 GO:0005515
Mtr3g4351 660 PRINTS Bromodomain signature 153 169 IPR001487 GO:0005515
Mtr3g4351 660 PRINTS Bromodomain signature 169 187 IPR001487 GO:0005515
Mtr3g4351 660 PRINTS Bromodomain signature 187 206 IPR001487 GO:0005515
Mtr3g4351 660 MobiDBLite consensus disorder prediction 20 34 - -
Mtr3g4351 660 Gene3D - 122 241 IPR036427 GO:0005515
Mtr3g4351 660 SUPERFAMILY Bromodomain 119 230 IPR036427 GO:0005515
Mtr3g4351 660 SMART bromo_6 117 225 IPR001487 GO:0005515
Mtr3g4351 660 MobiDBLite consensus disorder prediction 419 473 - -
Mtr3g4351 660 ProSiteProfiles Bromodomain profile. 136 206 IPR001487 GO:0005515
Mtr3g4351 660 MobiDBLite consensus disorder prediction 35 49 - -
Mtr3g4351 660 MobiDBLite consensus disorder prediction 434 451 - -
Mtr3g4351 660 MobiDBLite consensus disorder prediction 75 94 - -
Mtr3g4351 660 PANTHER BROMODOMAIN CONTAINING PROTEIN 12 476 - -
Mtr3g4351 660 MobiDBLite consensus disorder prediction 225 239 - -
Mtr3g4351 660 CDD Bromodomain 124 220 - -
Mtr3g4351 660 PANTHER BROMODOMAIN-CONTAINING PROTEIN-RELATED 12 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4351 Mtr-Chr3 57484327 57488906 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4351 K22184 - gmx:100783010 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4351 3 57484327 57488906 Mtr3g4351 3 57484327 57488906 ECH