Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4334 ATGCAAGCTGTATCATCTGGTATCGGATATGGTCTCAAATATCAGGCTAGATGCATATCAGATGTGAAAGCAGATACAGATCACACAAGTTTCCTCGCCGGAACTCTTAGCCTTAAAGAAGAAAATGAGGTACATCTTATTCGGCTTTCGGCAAATGGAACCGAACTTTTCTGTGAGGGACTGTTTTCGCATCCCAATGAGATCTGGGACCTTGTTTCTTGTCCTTTTGATCAACGCATTTTCTCAACCGTCTATTCCAACGGTGAAACCTATGGAGCAGCAATATGGCAGATTCCGGAGTTATATGGCGAGTTAAATTCTCCTCAATTAGAGAAAATTACATCTCTTGAAACTCAATCTGGTAAGATCAAATGTATTCTTTGGTGGCCAACTGGAAGGCACGATAAATTGATTAGCATCGATGATGAAAACCTATGCTTGTGGAGTTTGGATGTTTCCAAGAAAACTGCACAGGTACAATCCCAAGATTCAGCTGGTATGATGCACAAGTTATCTGGAGGAGCATGGGATCCACATGACATGAATTCTGTAGCTGCAACTTCTGAATCATCTCTCCAGTTTTGGGATGTGAGAACGATGAAGAAGACACTTTCAATTGAATGTTCCCATGTCCGCAGTGTTGACTACCATCCTAGAAAGAACAACATACTTGTTACAGCAGAGCATGAGTCAGGGATACGCATTTGGGATCAAAGAAAACCAAAAGTTCCAATCCAAGAGCTTCCAGGCCACACACATTGGACATGGATTGTCAAGTGTAACCCAGAGTATGACGGAATGATCCTGAGTGCTGGAACGGATTCGACTGTCAACTTGTGGTCGGCCTCGATAAACCATGATGAGTTACCAACTGAAAGCCAAGCAGAGTCATCTGTCAGTTTGGTTGATCCACTGCTTAATACATACAGCGATTATGAAGACAGTATTTATGGGCTTACATGGAGTTCTCGTCAACCATGGATTTTTGCATCTTTGTCCTATGACGGAAGGGTGGTTCTAGAATCTATGAAGCCTTTCATCTCCAAAAAATGA 1053 0.4236 MQAVSSGIGYGLKYQARCISDVKADTDHTSFLAGTLSLKEENEVHLIRLSANGTELFCEGLFSHPNEIWDLVSCPFDQRIFSTVYSNGETYGAAIWQIPELYGELNSPQLEKITSLETQSGKIKCILWWPTGRHDKLISIDDENLCLWSLDVSKKTAQVQSQDSAGMMHKLSGGAWDPHDMNSVAATSESSLQFWDVRTMKKTLSIECSHVRSVDYHPRKNNILVTAEHESGIRIWDQRKPKVPIQELPGHTHWTWIVKCNPEYDGMILSAGTDSTVNLWSASINHDELPTESQAESSVSLVDPLLNTYSDYEDSIYGLTWSSRQPWIFASLSYDGRVVLESMKPFISKK* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4334 350 Gene3D - 14 349 IPR015943 GO:0005515
Mtr3g4334 350 PANTHER WD-REPEAT PROTEIN 1 349 IPR040323 -
Mtr3g4334 350 PANTHER WD REPEAT-CONTAINING PROTEIN DWA2 1 349 - -
Mtr3g4334 350 ProSiteProfiles Trp-Asp (WD) repeats profile. 248 281 IPR001680 GO:0005515
Mtr3g4334 350 SUPERFAMILY WD40 repeat-like 18 340 IPR036322 GO:0005515
Mtr3g4334 350 Pfam WD domain, G-beta repeat 244 281 IPR001680 GO:0005515
Mtr3g4334 350 SMART WD40_4 302 342 IPR001680 GO:0005515
Mtr3g4334 350 SMART WD40_4 241 281 IPR001680 GO:0005515
Mtr3g4334 350 SMART WD40_4 197 237 IPR001680 GO:0005515
Mtr3g4334 350 SMART WD40_4 109 149 IPR001680 GO:0005515
Mtr3g4334 350 SMART WD40_4 55 97 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4334 K23289 - gmx:100779030 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4334 3 57269714 57274373 Mtr3g4334 3 57269714 57274373 ECH