Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4329 ATGGCCTTCTCTACCTCTTCCTTACTTTCTACAAACTTCTTAGGAGCACGAAACATTCCAACCCCCAAAACAACCAAACCTTCAATTTCACTACCATTATTCTTCAAAACAAGATTCTTAAACTCTCAAAATGACAACAACAATAATAATTCAGAACCTATTAAATCAGCTGCTGTATCAGCTCTTATCTTATCCTCTATGTTTACTCCGGCGGCACTCGCTGCCGACAACCTCCCACCACCACCACCTGTTCTCGAAGCACAACCAAACCAACTAAACCCCGCAAATTCAACTTCACCTTTCTCTCAAAATATTTCACTCACAGCACCAAAACCACAATCACAATCTTCCACTGATCTCCCCGATGGTAGCCAGTGGCGTTACAGTGAGTTTTTAAACGCAGTAAAAAAGGGTAAAGTTGAACGAGTTAGGTTCAGTAAAGACGGTTCTGTCCTTCAACTAACCGCCGTTGATGGCCGGAGAGCAAACGTTATCGTTCCCAACGACCCTGACCTTATCGATATTCTAGCAATGAACGGCGTTGATATTTCCGTTTCCGAAGGTGAACAAGGTAACGGTTTGTTCAGTTTCGTTGGTAGTTTATTGTTACCGTTCCTTGCATTTGCGGGTTTGTTTTTGATTTTCCGTAGAGGTCAAGGAGGACCCGGTGGGCCTGGTGGGCTTGGTGGGCCTATGGATTTTGGTAGATCGAAATCTAAATTCCAGGAAGTACCAGAGACTGGAGTAACTTTTGCTGATGTGGCCGGTGCTGATCAAGCGAAATTGGAACTACAAGAAGTTGTTGATTTCTTGAAGAATCCTGATAAGTACACTGCTTTAGGCGCTAAGATTCCTAAAGGATGTCTTTTAGTGGGGCCACCTGGAACTGGAAAGACATTGTTGGCGAGGGCAGTGGCCGGTGAAGCTGGTACACCGTTCTTTTCATGTGCGGCTTCGGAGTTTGTGGAACTGTTTGTGGGAGTTGGTGCTTCTAGAGTTAGGGATTTGTTTGAGAAGGCGAAGTCGAAGGCACCGTGCATTGTGTTTATTGATGAGATTGATGCTGTTGGGAGACAGAGAGGAGCTGGTCTTGGTGGTGGAAATGATGAGAGGGAACAGACTATTAATCAGCTTTTGACTGAGATGGATGGATTTTCTGGTAATTCGGGCGTTATTGTCTTGGCTGCTACTAATAGACCTGATGTTCTTGATTCTGCATTGCTTAGACCTGGAAGGTTTGATAGACAAGTTACTGTTGATAGACCTGATGTTGCCGGTAGAGTTAAAATCCTTCAGGTGCATTCTAGAGGAAAAGCACTTGCAAAGGATGTTGACTTTGACAAAATTGCCAGGAGAACCCCAGGGTTCACAGGAGCTGATCTGCAGAATCTGATGAACGAAGCAGCTATTCTTGCAGCTAGGCGTGACCTCAAAGAAATAAGTAAAGATGAGATAGCTGATGCGCTTGAGAGGATCATCGCTGGACCAGAAAAGAAAAATGCCGTTGTCTCAGAAGAGAAGAAGAAATTAGTAGCCTATCATGAGGCTGGCCATGCTTTAGTAGGTGCTTTGATGCCTGAATATGACCCTGTAGCCAAGATATCTATTATACCTCGTGGCCAAGCTGGTGGTCTCACCTTTTTTGCTCCTAGCGAAGAGAGGCTTGAGTCTGGATTGTACAGTAGAAGCTACTTGGAGAATCAGATGGCGGTTGCACTTGGAGGAAGGGTTGCCGAAGAGGTTATTTTTGGCCAGGATAATGTCACCACCGGGGCGTCAAATGACTTCATGCAAGTTTCACGAGTGGCGAGACAGATGGTTGAGAGATTTGGGTTCAGCAAAAAAATTGGACAGGTTGCCATTGGCGGGGGTGGTGGAAATCCATTCTTGGGACAACAGATGTCTTCACAAAAAGATTATTCCATGGCAACCGCTGATATAGTGGATAAGGAAGTTAGAGAACTGGTAGACAAAGCATATGAGAGGGCAACACAAATTATCAACACTCACATTGACATCCTTCATAAGCTTGCTCAACTTCTCATAGAGAAAGAAACTGTTGATGGTGAAGAGTTCATGAGTCTATTTATTGATGGAAAAGCAGAATTGTATGTTTCATAA 2121 0.4427 MAFSTSSLLSTNFLGARNIPTPKTTKPSISLPLFFKTRFLNSQNDNNNNNSEPIKSAAVSALILSSMFTPAALAADNLPPPPPVLEAQPNQLNPANSTSPFSQNISLTAPKPQSQSSTDLPDGSQWRYSEFLNAVKKGKVERVRFSKDGSVLQLTAVDGRRANVIVPNDPDLIDILAMNGVDISVSEGEQGNGLFSFVGSLLLPFLAFAGLFLIFRRGQGGPGGPGGLGGPMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEIADALERIIAGPEKKNAVVSEEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGGGGNPFLGQQMSSQKDYSMATADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKAELYVS* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4329 706 CDD AAA 255 420 - -
Mtr3g4329 706 Gene3D - 120 192 - -
Mtr3g4329 706 SUPERFAMILY FtsH protease domain-like 502 696 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mtr3g4329 706 SMART AAA_5 284 423 IPR003593 -
Mtr3g4329 706 Pfam AAA+ lid domain 443 484 IPR041569 -
Mtr3g4329 706 ProSitePatterns AAA-protein family signature. 391 409 IPR003960 GO:0005524|GO:0016887
Mtr3g4329 706 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 196 695 IPR005936 GO:0004176|GO:0004222|GO:0016020
Mtr3g4329 706 MobiDBLite consensus disorder prediction 79 122 - -
Mtr3g4329 706 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 11 706 IPR005936 GO:0004176|GO:0004222|GO:0016020
Mtr3g4329 706 Pfam Peptidase family M41 502 695 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mtr3g4329 706 Pfam ATPase family associated with various cellular activities (AAA) 289 420 IPR003959 GO:0005524|GO:0016887
Mtr3g4329 706 Gene3D - 422 497 - -
Mtr3g4329 706 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED 53 698 - -
Mtr3g4329 706 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 248 492 IPR027417 -
Mtr3g4329 706 MobiDBLite consensus disorder prediction 89 122 - -
Mtr3g4329 706 Gene3D Peptidase M41 498 701 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Mtr3g4329 706 PANTHER METALLOPROTEASE M41 FTSH 53 698 - -
Mtr3g4329 706 Gene3D - 239 421 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4329 Mtr-Chr3 57217574 57221855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4329 244 697 Miscellaneous Gene Families AT5G53170 49.890 1.59e-136 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4329 K03798 - rcu:8267886 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4329 3 57217574 57221855 Mtr3g4329 3 57217574 57221855 ECH