Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4310 ATGGATACCCTTTCTCTCTTCTGCACCGGAGCTCTCCTCGCCGGCGGCCTCTACTGGTTCGTCTGCGTTCTCGGCCCCGCCGAACGAAAAGGCAAACGCGCCACCGATCTATCCGGCGGTTCAATTTCCGCTGAAAAAGTCCAAGACAGTTACGATAAATACTGGTCTTTCTTCCGCCGCCCAAAAGAGATCGAAACCGCTGAGAAAGTTCCAGATTTCGTCGATACATTTTACAATCTCGTTACCGATATTTACGAATGGGGTTGGGGTCAATCCTTCCATTTTTCACCCGCTATTCCCGGTAAATCTGACCGTGATGCCACTCGCCTCCATGAAGAAATGGCCGTAGATCTAATCGAGGTTAAATCTGGTGATAAAATTCTCGATGTAGGTTGCGGTGTTGGTGGGCCCATGAGAGCTATCGCGTCTCACTCACGCGCTAACGTTGTAGGTATCACGATCAACGAGTATCAAGTGAATCGTGCAAAATTACACAACAAAAAAGCTGGTTTAGATTCTCTATGCGATGTTGTTTGTGGTAATTTTCTGAAGATGCCGTTTCCCAGTAACAGCTTCGACGGCGCGTATTCAATTGAAGCCACGTGCCACGCGCCTAATCTCGAAGAAGTTTACGCTGAAATTTTTAGGGTTTTGAAACCTGGTGCTCTTTACGTTTCATATGAATGGGTTACTACTGAGAAATTTGTAGCTGAAAACGCTGAACATGTTGAGATTATTCAAGGGATTGAAAGAGGTGATGCTCTTCCTGGGCTTAGAACCTACGCAGATATAGCTGAAGCGGCTAAGAAGGTTGGGTTTGAGGTTGTTAAGGAACGGGATCTGGCTCAGCCACCGTCTCATCCATGGTGGACCCGTTTGAAAATGGGTAGGATTGCTTATTGGCGTAACCATATTGTGGTAACGGTTCTGTCTGCTTTGGGAATTGCACCTAAAGGAACCGTTGATGTTCATGAGATGCTGTTCAAGACTGCTGACTTTTTGACCAGAGGGGGTGATTCTGGAATTTTCTCTCCTATGCACATGATTCTCTGCAGAAAACCAAAAGAAGATAATTCAAATTAA 1083 0.4598 MDTLSLFCTGALLAGGLYWFVCVLGPAERKGKRATDLSGGSISAEKVQDSYDKYWSFFRRPKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPAIPGKSDRDATRLHEEMAVDLIEVKSGDKILDVGCGVGGPMRAIASHSRANVVGITINEYQVNRAKLHNKKAGLDSLCDVVCGNFLKMPFPSNSFDGAYSIEATCHAPNLEEVYAEIFRVLKPGALYVSYEWVTTEKFVAENAEHVEIIQGIERGDALPGLRTYADIAEAAKKVGFEVVKERDLAQPPSHPWWTRLKMGRIAYWRNHIVVTVLSALGIAPKGTVDVHEMLFKTADFLTRGGDSGIFSPMHMILCRKPKEDNSN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4310 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 354 IPR029063 -
Mtr3g4310 360 CDD AdoMet_MTases 126 230 - -
Mtr3g4310 360 Pfam Sterol methyltransferase C-terminal 291 354 IPR013705 GO:0006694|GO:0008168
Mtr3g4310 360 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Mtr3g4310 360 PANTHER - 1 357 IPR044625 GO:0008168|GO:0032259
Mtr3g4310 360 PANTHER 24-METHYLENESTEROL C-METHYLTRANSFERASE 3 1 357 - -
Mtr3g4310 360 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Mtr3g4310 360 Gene3D Vaccinia Virus protein VP39 44 310 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4310 Mtr-Chr3 57007012 57008507 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4310 116 222 Acyl Lipid Metabolism Gene Families AT1G73600 31.776 2.55e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4310 K08242 - gmx:100804517 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4310 3 57007012 57008507 Mtr3g4310 3 57007012 57008507 ECH