Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4282 ATGCATCAAGGTGATTACACCTCTGCTCCATATTACCAATTCCCACACATGCAACAAAACCCAAACCCAATCCCCAATCCTACACCCCCTCAATCCGATCCAATTCCTAATCACTACGCTTCTGCACCCCCCTTTACTCCCAATTACGATTATTCTTCTACCTATTCTCCTTACCCTCCTCATAATCCCGATCACGTTCCTTCCTCAAACCCTAGTTTCAATCCTCCTCCTTTCGAATCATCTAATCCTCTTTATCAACAACCTTCACAACCTTATTACCCACCCTACGATCAACAACATCAAACGCCTCTAAATTATGCACCTCCTAATCCCAATCCCAATTTATATAATTCATCTCCGTATTCTGTTCCTCCGATTCCATCATACGAAACCTCATACGAGAATCCGGTGAAATCCGGTGGCGGTGGCGGTGCTTATTTTGATGACAGATACGGAGGTAGTTTTAATCGGAGAAATTCTGATTTGGGATCTGAATTATACGGTAAGCGTCACGATGGTGGTTTGTCAAGGTATGAATCCGTTGGTGGTGGTGGTGATGAAGGTTATGGAGACGGGGTGTATGCTTATGAAGGAGGAAAAGTGGAACCTTATGGGGCGCGTGGTACGGCTTCAAAGTCTTCGACTTGGAATTCTTCGTCAACACCATCTTTTGATGATTTTGGGAGGCCGATTAGTTTTTCTTCTCCGAAAGAATCTTCGGTGGCAAGTAAGATTGTGAAAGCTGTTCCGAAGGTTGATACACAAGATGATGTGAAGAGTGGGGTGCAGAAGTTTCGAGTTAAGCTTTTGGCTGAGAGTGGTGGTCAGAGTACAATGGATGTTCTCTGTCAGGTTGGTTTGGATGGACTTCGCATGCTAGATCCGAATACCAGTCGGACATTGAGAATATATCCTCTTGAGAACATAACCAGATGTGATAGATTCGATTCATCTACCTTTGCATTTTGGTCGAAGAGCCCTGTAGACATCGAGCCAAGACGAATCAGATTACAATCTAATAGTTACACTACGAACACACTTTTGGATACTGTGACTGCTGCAACCATACAGTTCAAGGAAATGGGTGGAAGCAGGAGGCCTGCTGAATCATTTAAAACAAATGAACAGCCTGCCGAAAGAAAGAAAGGCCTTGGTGATTGGATGAATATCATTAAACCTGCCAACGAAGAGAAAGATCACTGGGTCCCAGATGAAGCAGTCTCAAAATGTACAGCATGTGGTACTGATTTTGGGGCTTTTATACGCAAGCATCACTGTAGGAACTGCGGTGATATTTTCTGTGACAAATGTACACATGGCAGAATCGCTTTAACAGCTGAGGAGAATGCTCAGCCAGTACGAGTTTGCGACCGATGCATGGCAGAAGTGACTCAAAGGCTGAGTAGCGCTAAAGAGTCATCAAATAAACCTCTGTTGCAGAGCCATGAGGATATGGCTCGGAAACTTCAGGAGGAGTTGGAAAGAAATCGGAAGACATCAGGTTCAAAGTCTGACGGATCTGGAAAACGGATGAAGGAAGTTGCATGTCCTATTTGCACTGTCCATCTGCAGGTTCAGGTACCTAGCTCAGGTTCAGAGACCATTGAGTGTGGAGTTTGCCAGCACCCATTTCTTGTGAGTTCTTATTGA 1650 0.4448 MHQGDYTSAPYYQFPHMQQNPNPIPNPTPPQSDPIPNHYASAPPFTPNYDYSSTYSPYPPHNPDHVPSSNPSFNPPPFESSNPLYQQPSQPYYPPYDQQHQTPLNYAPPNPNPNLYNSSPYSVPPIPSYETSYENPVKSGGGGGAYFDDRYGGSFNRRNSDLGSELYGKRHDGGLSRYESVGGGGDEGYGDGVYAYEGGKVEPYGARGTASKSSTWNSSSTPSFDDFGRPISFSSPKESSVASKIVKAVPKVDTQDDVKSGVQKFRVKLLAESGGQSTMDVLCQVGLDGLRMLDPNTSRTLRIYPLENITRCDRFDSSTFAFWSKSPVDIEPRRIRLQSNSYTTNTLLDTVTAATIQFKEMGGSRRPAESFKTNEQPAERKKGLGDWMNIIKPANEEKDHWVPDEAVSKCTACGTDFGAFIRKHHCRNCGDIFCDKCTHGRIALTAEENAQPVRVCDRCMAEVTQRLSSAKESSNKPLLQSHEDMARKLQEELERNRKTSGSKSDGSGKRMKEVACPICTVHLQVQVPSSGSETIECGVCQHPFLVSSY* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4282 549 MobiDBLite consensus disorder prediction 121 135 - -
Mtr3g4282 549 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 390 469 IPR013083 -
Mtr3g4282 549 Gene3D - 248 321 IPR011993 -
Mtr3g4282 549 MobiDBLite consensus disorder prediction 20 41 - -
Mtr3g4282 549 SUPERFAMILY PH domain-like 263 327 - -
Mtr3g4282 549 PANTHER PROTEIN FREE1 1 548 - -
Mtr3g4282 549 SMART fyve_4 396 465 IPR000306 GO:0046872
Mtr3g4282 549 Pfam FYVE zinc finger 400 464 IPR000306 GO:0046872
Mtr3g4282 549 PANTHER PROTEIN FREE1 1 548 IPR045893 GO:0036258|GO:0043130
Mtr3g4282 549 MobiDBLite consensus disorder prediction 1 137 - -
Mtr3g4282 549 MobiDBLite consensus disorder prediction 60 82 - -
Mtr3g4282 549 SUPERFAMILY FYVE/PHD zinc finger 399 472 IPR011011 -
Mtr3g4282 549 MobiDBLite consensus disorder prediction 106 120 - -
Mtr3g4282 549 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 404 464 IPR017455 -
Mtr3g4282 549 Coils Coil 479 499 - -
Mtr3g4282 549 MobiDBLite consensus disorder prediction 83 105 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4282 392 465 EF-hand Containing Proteins AT3G14270 36.250 1.17e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4282 - - gmx:100794840 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4282 3 56681354 56686814 Mtr3g4282 3 56681354 56686814 ECH